KEGG   Scomber scombrus (Atlantic mackerel): 134000788
Entry
134000788         CDS       T10651                                 
Name
(RefSeq) claudin-20
  KO
K06087  claudin
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272  Virion - Hepatitis viruses
ssco04382  Cornified envelope formation
ssco04514  Cell adhesion molecules
ssco04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    134000788
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    134000788
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    134000788
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134000788
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssco03037]
    134000788
   04147 Exosome [BR:ssco04147]
    134000788
   04515 Cell adhesion molecules [BR:ssco04515]
    134000788
Cilium and associated proteins [BR:ssco03037]
 Other cilia and associated proteins
  Stereociliary proteins
   134000788
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   134000788
  Exosomal proteins of colorectal cancer cells
   134000788
Cell adhesion molecules [BR:ssco04515]
 Immunoglobulin superfamily
  L1 family
   134000788
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like
Other DBs
NCBI-GeneID: 134000788
NCBI-ProteinID: XP_062296254
LinkDB
Position
19:complement(18448647..18449480)
AA seq 241 aa
MASTGMQIFGFVLALLGIMGAMVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTG
MFSCTLKYSVLSLPAYLQTARTTMVLCCVLAAMGLCLASLGLKCTRWGGGRRSKRHAAIA
SGGCFVAAGFLCLVPASWFTNEVITNFLDSSVPESNKFEPGGAVYVAFVSAGFLLMGGSI
FCMSCSGKRHGPQDLVLLPPPDKLLLQQQQQQLLQQQELQHQYCSLSPLDNKTGYSLQDY
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcatccacaggcatgcagatatttggatttgtcctggcactattgggcatcatgggt
gccatggtagccactctgctgcccaactggaaggtcagcgcagatgtgggctccaacatc
atcacagcgatctcccagatgcagggactgtggatggactgtacatggtacagcacaggg
atgttcagttgcacgcttaaatattcagtgctttcactacctgcgtacttgcagactgcc
cgtaccaccatggtcctgtgctgcgtactggctgccatgggcctctgccttgcatccctg
ggactcaaatgcacacgttggggaggcggacggcgctccaaacggcatgctgcgattgcc
agtggtggctgctttgtcgctgcaggctttctgtgtctggtgcctgcttcctggtttacc
aacgaggtcatcaccaacttcctggactccagtgtgcccgagagcaataagtttgagcct
gggggtgctgtgtacgtggcctttgtttcggcaggattcctcttaatgggggggtccatc
ttctgcatgtcctgctcggggaagaggcatggcccccaggacctggtcctgctcccaccc
cctgacaaattgctgctacagcagcagcagcaacagctgcttcagcagcaggagctccag
caccagtactgctctctctccccattagacaataagactggctacagcctgcaggactat
gtgtaa

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