Scomber scombrus (Atlantic mackerel): 134000834
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Entry
134000834 CDS
T10651
Symbol
pdss2
Name
(RefSeq) decaprenyl-diphosphate synthase subunit 2
KO
K12505
decaprenyl-diphosphate synthase subunit 2 [EC:
2.5.1.91
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
134000834 (pdss2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ssco01006
]
134000834 (pdss2)
Enzymes [BR:
ssco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.91 all-trans-decaprenyl-diphosphate synthase
134000834 (pdss2)
Prenyltransferases [BR:
ssco01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
134000834 (pdss2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
134000834
NCBI-ProteinID:
XP_062296313
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All DBs
Position
19:complement(21687093..21721179)
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AA seq
379 aa
AA seq
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MFAATLQRLSSRGQRTLSLFSSSGPSNWSKVVSDAEKIVGYPTSFMSLRCLLSDELSNVA
MHVRKLVGTQHPLLNTARGFVYDSKNNLQMRGLVVLLMSKAAGPSHTASDLLAQDMVSGI
YPNQRNLAEITELIHTAFLVHRGIVDLKEWTVSDGPLKDMQFGNKMAVLSGDFLLANACT
GLAQLDNTKVVELISSAIGDLVQGIYYENSNNTEENILTDGVDMATWEEQTFLSHGALLA
KSCQAAMELAKHDKESQRLAYKYGKHLSLGHKLNSDLQPFVKSSMGESSPFSFSAAPVVF
HRQIIGQERWHQQLEQARTQRNQLNYSKLLAAVKSEKGVSSAVDLCCYHGNKALEAIQAF
PSSEARSALENIASAITKF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagctacactgcagagactgtccagccgaggacagaggacgctcagtctcttc
tccagctcaggaccttcaaactggagcaaagtggtgtctgacgcggagaagatagtcggc
tatccaacctcgttcatgagcctccgctgcctgctcagcgacgagctcagcaatgtggcc
atgcacgtcaggaagctggtcgggactcagcacccattactcaacactgccagaggcttt
gtctacgacagcaagaacaaccttcagatgaggggactggtcgtcctactcatgtcgaaa
gccgctgggccgagccacacagcctcagatctcctggcccaggacatggtcagcgggatc
taccccaaccagcggaatctggcagaaatcacagagttgatccacacggcgttcctggtg
catcgcgggatcgtcgatctgaaagagtggacggtttcagacggcccgctgaaggatatg
cagtttgggaataagatggctgtcctcagtggggacttcctgctagccaatgcttgtacc
ggactggcccagttggataacactaaggttgttgaactgatctccagtgccattggtgat
ttagttcaaggaatctactacgagaattccaataacacagaggagaatattctcaccgat
ggcgtcgacatggcgacatgggaggagcagacgttcctgtctcacggggcgctgctggcc
aagagctgtcaagctgcgatggagctcgccaaacacgacaaggagtcccaaagacttgcc
tacaagtacggcaaacacctctctctgggccacaagctcaactctgacctgcagccgttt
gtgaagagcagcatgggagagtcgtcgccgttcagtttcagcgccgccccggtggttttc
caccgtcagatcatcggccaggagaggtggcatcagcagctggagcaggccagaacacag
agaaaccagctcaattactcaaagcttttggcagcggttaagtcggagaaaggcgtgagc
tcagcagtggacttgtgctgttaccatggcaacaaggctctggaggccatccaggctttc
ccctcctccgaggctcgatccgccttggagaacattgcctccgccatcaccaaattttga
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