Scomber scombrus (Atlantic mackerel): 134000847
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Entry
134000847 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
134000847
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Other domain-containing proteins
FERM domain-containing proteins
134000847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
RA_3
SNX17-27-31_F1_FERM
Motif
Other DBs
NCBI-GeneID:
134000847
NCBI-ProteinID:
XP_062296334
LinkDB
All DBs
Position
2:6246470..6265281
Genome browser
AA seq
2098 aa
AA seq
DB search
MEVQDRSRSPSRRTSRVEQVVGRWLRRSRDLGSRSHSLSRDRVTIDGKTTESGGSDQRNY
PFRFNVQIQRDPNLNSHGLTLSPQTPLLVQDITPGGPADGRLVPGDQLVKINNVAVDDLT
PEQAAEIIRECQDTLTMTVLRTMLGPKSSFITPEKRAKLKSNPVKVHFAEEVEVNGHSQG
NSLLFLPNVLKVYLENGQTKAFKFEPSTTVKDIVMTLKEKLSLSRIEHFSLMLEQRHSAT
KLLLLHEEERIHQLVQKKEAHDYRCLFRVCFMPKTLQTLLQDDPTAFEYLYLQGVNDVLQ
ERFAVEMRCNTALQLAALHIQERLASCGQSPKTNLKIITKTWGIENFVSSTLLRNMREKD
LRKAIAYHMKKSQSLHDPKQKGLTADQARINYLEELSDLKSFGGKSFSATMMLQDRESMV
TLLVGARYGVSQVVNHKLSILSTLTEFTSITRIELLPESDKVSLVKIYLQDIKPITLLLE
SVAAKDMSCLIAGYCRVFVDPNLNIFPWIDLSKKHRVSAEEGYVSRRGSDSDNSSDLDME
PLVSLVSHDDKPCPRVRSASDPDGRKRKDRDKRRHKDGKEKGDKPWADKKQKEEKDADTE
KGKSPPDKNKDTEHKEEAERAQGGGQIQIEITNNNSGEQQEKVGTQKEAQEAEEQPSASE
ASDSCHTDSRVLTSPSSDSLDALEEDDLITCSSSSIHANAHMHSSLQLHPYSHGHAQTHL
LAPPPAHSHPLIHPSTHDRGEGGCRRSGDGADPQLLTSASTSADTLLKRCSGTPCSDDSS
LCFAELSRLVEYLPSPPEASDDDEDEEEELRRRRRRVWKEMDESVRRAGEGGSIGGEGIF
KENPLSPPSSSSRTEFVFNFDQSDASCYYKLCSNITPDSARSLPHLLNHDEEGEGEKVEG
DQVELEPIPILQPPPGFGDSSSDEEFFDARDGFTSPEDPTSGAVPRGDSYXHNALKGNMN
DGKPEQNRKGGEEGGGRETLYQLRKRSRKRRSFMETDYTSRVSYPKQDPQSQHASEQTRN
PSPTVSCLTHSEGEPALLESKPILSKPLPHKPDSPSRFGSNGQARDPQAFSRTRKQEMEM
EPDAMESKSVTDHLKTASPTITVVRCRVDPDGKESADRRGDGKEEGEGQEEMDEGKSESE
EEEPTGVPGNGPFNTHIFLPEVTKVEGKGEDAGEEGKGGVTEYSSSSKRPLIGAEKQPEA
NPPPECLTDVNKNDSNILLEAALIAPKQNLHAGEYMLDNESVHSNRPSYSPPPPPPSSPL
PPTPVLHKSQSDCFIGEEEDGKTTRSSTEMSLSNSEEMPLSEQNHTNKAQLHLEIPTSII
EYEAFSIDSTMIASDEVSNSTNSDNVFDDDEMTNSLNSSSSDTKAVDRDDWTVATRPSSS
AKSTTEGKDESEMSEAHTRIYPMNSEYTRAINSITAKLGAATSVTSPTYNSGATLKSEVT
QEIDSCSDQNVDKPRSESTTSCAEAKGSLATPSSAKASATTIHDVSKEPPSPTHFLYQSC
SPSFMGSLSASTLRGKIQMLPLYLSRSQETLNQAGVGNVAESPTEDKSRGNNEITIQVTD
VHDVTQTIDFEMDPIEESVESDDSDTTVTGVEVEGAFFVDTTSAKSSHSVSEVKEAAEMV
AVVLDNDSSLLPVQTEPKLQHRNQDFYNEHNKTTPGPITEPPTSLLSSLQRDSTGLMLDT
PGPITDSPASQMKVTSPSEDIPVYKISTPSPSIPPPIVVTTQNLNGPGFPFHSQTHKVRR
TSVDRPLMGLCRPTEQNSDSPKTFSSGCKVFTICEDPSQTKTPAEMGPVLPLKPDFGCSS
VLASGCESVVEGVQVPLDACGCPTVYTNCFSGGDSFDEELTVYEYSCRTQSSGVTQTSGA
GLPLMTSPPVPSFLSTSSTHSPSFPRSILFSSSTSELSPLLSPLSEASDCFMSQTHKDTI
SRLGQQRYPQPPTGFQVLRVDVDQLLSILESSNADRSVGGHGGRHPRDTCPAHFTENKRV
LQLEARRLMSGCQKVVGIGQSPEEMLHSLADSFRTLVELAGICLWFSGCDRCDRRNAEAV
AGLADVARSFRDFCLAAERASSKRSCQDLSTKLLAKQCTALTASVFCLTQLFRTLTAL
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcaggacaggagccgctccccttcccgcaggaccagcagggtcgagcaggtg
gttggacgatggctgagacggtcccgagacctaggcagcaggtctcactctctgagcaga
gacagggtgacaatagatggaaagacaaccgagtccggtggctccgatcagaggaattac
ccctttcgcttcaatgttcagatccagcgggacccaaacctcaattctcatggcctcact
ctgtccccccagactcccctcctggtgcaggatatcaccccaggtggtcctgcagatggc
cggctcgtccctggcgaccagctcgtgaagatcaataacgttgctgtcgatgacctgacc
ccggagcaagctgctgagataatcagggagtgtcaagacactttgacaatgactgtcctc
agaacaatgctgggcccaaagtcatcattcataacaccagagaagagggccaagctcaag
tccaaccctgtgaaagttcactttgctgaggaggtggaagtcaatggacactctcagggc
aattcgctgctcttcctgcctaatgtcctgaaggtgtatctggagaacgggcagaccaag
gcctttaaatttgagcccagcaccacagtcaaggacattgtgatgacgctgaaagaaaag
ctgtctctgagccgtattgagcatttctccctgatgctggagcagcggcacagtgccacc
aaactgctgctcttacatgaagaggagaggatacaccagctggtgcagaagaaagaggcc
cacgactacagatgtctgttccgtgtttgtttcatgcccaaaaccctccagactctgctg
caggatgaccccactgccttcgagtacctctacctgcagggggtgaatgatgtgctgcag
gagcgttttgcagtagagatgaggtgtaacaccgccctgcaactcgctgcgctgcacatc
caggagaggctagcgagctgtggacagtcgccaaagaccaacctgaagataataacgaaa
acgtggggcatagagaactttgtgtcttccacattgttgaggaacatgcgagagaaagat
ctgaggaaggccatcgcctaccacatgaagaagagccaatcactgcacgatcccaagcag
aagggcctgacagccgatcaggcgcggataaactatctggaggagctgagcgacctcaaa
tcatttggagggaaatccttcagtgccaccatgatgctccaggacagggagtccatggtg
accctgttggtgggggcgcgctacggggtgagtcaggtggtcaaccacaaactgagcatc
ctgtccaccctcacagagttcaccagcatcacgcgcatcgagctgctgcctgaatccgac
aaggtcagcctggtcaaaatatacctgcaggacatcaagcccatcacgttactgctggag
tcggtggcagccaaggatatgtcctgcctaatagcagggtactgtagagtgtttgtcgac
cccaacctcaacatctttccctggatagacctctccaagaaacacagagtgtctgctgag
gaaggttacgtgtcacggcgtggcagtgactcagacaactcctcagacctggacatggag
ccgctggtctccctagtgtctcacgatgataagccctgcccacgtgtcagatccgcatca
gacccagatggaagaaaacggaaagacagggacaaaaggagacacaaagatggcaaagaa
aaaggtgataaaccatgggcggataaaaaacagaaggaagaaaaggatgctgacacagaa
aagggaaagtctccaccagataagaataaagacacggagcacaaagaggaggcagagaga
gcgcagggtggcggacagatacagatcgagataacaaacaacaactctggggaacaacag
gaaaaagtggggacacaaaaagaggcacaagaagctgaggagcagccttctgcgtcagaa
gcatccgattcttgtcatactgactcgcgggtcctcacgagcccctcctccgactctctc
gacgccctggaggaagatgacttgattacctgttcatcttcctccatccatgccaatgcc
cacatgcactcttccctccagcttcacccttactcccatgggcacgctcagacccacctc
ctcgctcccccacctgctcattcccatccccttatccacccctcaactcacgacagagga
gaagggggctgcaggaggtcaggcgacggagccgacccccaactcctcacatccgcctcc
acgtcggcagacacgctcctcaaaagatgttcgggaaccccctgctctgatgactcctcc
ctgtgtttcgccgagctctctcgactcgtggaatacctgccgagccccccggaggccagc
gacgacgatgaagatgaagaagaagaactgaggagaaggaggaggagggtgtggaaagag
atggatgagtcggtgagaagagcaggagaaggagggagcataggcggggagggtattttt
aaagaaaatccactttcccctccctcatcctcctcccgcacggagtttgtgtttaacttt
gaccaaagcgacgcaagctgctactacaaactgtgctccaacatcacccccgacagcgct
cgcagcctcccccacctgctgaatcatgatgaggaaggagagggagagaaggtggaggga
gatcaggtagaactggagccaatccccatcctccagccaccgcctggctttggagacagc
agttctgacgaggagttctttgacgccagagatggtttcacctcacctgaagacccgacc
tcaggggctgtgccaagaggtgattcatattgacacaatgcactaaagggtaatatgaat
gatgggaaaccagaacagaacagaaaaggaggcgaggaaggaggaggcagagaaacgttg
taccagctcagaaagagatcccgtaaacgacgttccttcatggaaactgattacacttct
agggtgtcatatccaaaacaagatccacaatctcagcatgcttcagagcaaacccggaat
cccagtcccaccgtctcctgcctcactcactctgaaggggaaccagccctgctcgagtca
aaacctattttgtccaaacccctcccccacaaaccagactctccttctagatttgggtct
aacgggcaggcgagagacccacaggccttctccaggactaggaagcaagaaatggagatg
gaacctgacgcaatggaatccaaatcagtcacagaccacttgaagacagcgtcgcctacc
atcactgttgtccggtgcagagtggatccagatgggaaggagagtgctgatcggaggggt
gacggaaaggaggaaggggagggacaggaggagatggatgaagggaaatcagagagtgaa
gaagaggagccaacaggtgtgccagggaatgggccgttcaatactcatatatttttgcct
gaggtcactaaagtggagggtaagggggaagatgcaggagaagagggtaaagggggagtg
acagagtactcgtccagttcaaaaagacctctcattggtgctgaaaagcagccagaggcc
aacccaccgcctgaatgtttgacagatgtgaataaaaatgatagtaacatccttctggag
gccgctctgattgccccaaagcaaaacttacatgcaggggaatacatgcttgataatgag
agtgttcattcaaatcgtccgtcatactcaccaccaccccctccaccctcatcccctcta
cccccaacaccagttcttcacaaatcccaaagtgactgtttcataggggaagaagaagac
ggcaaaaccaccagaagctcaactgaaatgtctttatctaattccgaagagatgccactt
agtgaacaaaatcacaccaacaaagcacaattacacttagaaatcccaaccagtattatt
gaatatgaagccttcagtattgattctaccatgattgctagcgacgaagtatccaacagc
accaattcagataatgtttttgatgatgacgaaatgaccaattccctaaattctagttca
agtgacacgaaagctgttgacagagatgattggacagtagccacaaggcctagcagcagt
gctaaatcaactacagaaggtaaagatgagtctgaaatgagtgaagctcatacaagaatt
tatcccatgaattctgaatatactcgagctataaactccatcacagcaaagcttggagct
gctacaagtgtcacgtctcccacatataattcaggtgctacattgaaaagtgaggtgaca
caagaaattgattcatgctcggatcaaaatgtggataaacccagaagtgaatccaccacg
tcatgtgctgaagctaaaggtagtttggctactcccagttcagcaaaagctagcgcaacc
acaatccatgatgtctccaaagagcctccttctccaactcacttcctttaccagtcttgt
tcccccagcttcatgggcagtttatctgcctccacgcttagggggaagattcaaatgttg
cccctttatttatcgcgatcccaagaaaccctcaaccaagctggggtaggaaatgtcgct
gagagtcctactgaggacaaaagtagggggaacaatgagatcaccatccaagtaacagac
gttcacgatgtcacacaaacgatagattttgaaatggacccaattgaagaatcagtggag
tcagacgattcagatacaacagtcacaggagtagaagtggagggggcattttttgtggac
acaacctcagctaagagttctcattcggtatcagaagtgaaggaagcagcagagatggtg
gcggtggtgttggacaatgacagctcattgttgcccgtccagactgaacccaaactacaa
catagaaatcaagatttctacaacgaacataacaagaccactccaggaccaataacagag
cctccaacctctttactgagcagcctccaaagagattctacaggcctaatgttggacact
cccggccccataacagattccccggcatcacagatgaaagtcacaagtccaagtgaagac
attccagtttataaaattagcactccttcaccctccatccctcctccgatagtggtgacc
acacagaatctaaatgggccaggattcccttttcatagtcagacgcacaaagtaagaagg
accagtgttgacaggcctttaatgggtctttgtagaccgacagagcagaactcagactcg
ccaaaaacattttcctcaggctgcaaggtgtttaccatctgcgaggacccatcccagaca
aagacaccagctgagatggggcctgttctacccttgaagcctgactttggatgcagttcc
gtgctagcatctggatgtgagtcagttgtggagggcgtgcaggtgccactggacgcttgc
ggttgcccgacagtctacaccaactgcttcagtgggggggacagctttgatgaggagctg
acagtctacgagtattcctgccgcacacagagcagcggtgtgactcagacttctggagca
ggtcttcctctcatgacctcccctcctgttccctccttcctctccacctcctccacacac
tctccctcctttccacgctccatccttttctcctcctctacctctgagctgagtcctctc
ctctcaccattgtctgaggcctctgactgtttcatgtctcaaacgcacaaggacactatc
agtcggctaggccagcagcgctacccacaacctcccacaggtttccaagtgctccgtgtc
gacgtggaccagctgctctccatcctggagagtagcaatgctgaccgatctgtgggaggt
cacggaggtcgccacccaagggacacctgccccgcccactttacagagaacaaacgagtg
ctccaactggaggctcggcggctgatgtcaggctgccagaaagtggtggggattggacag
agcccagaggaaatgcttcactccctggctgacagtttccggaccctggtggagttggcc
ggcatatgcctctggttctccggttgcgacaggtgtgaccggaggaatgccgaggcagtt
gcgggtctggcagatgtggctcggtcattcagggacttctgcctggcagcagagcgtgcc
agcagcaagcgcagctgccaggacctgagcaccaaactgctagccaaacagtgcaccgcg
ctcaccgcctccgtcttctgcctcactcagctgttccgcacactcaccgcactatga
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integrated database retrieval system
