KEGG   Scomber scombrus (Atlantic mackerel): 134000923
Entry
134000923         CDS       T10651                                 
Symbol
lrr1
Name
(RefSeq) leucine-rich repeat protein 1
  KO
K10348  LRR-repeat protein 1
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssco04121]
    134000923 (lrr1)
Ubiquitin system [BR:ssco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     134000923 (lrr1)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_14 LRR_1 LRR_LRWD1 LRR_R13L1-DRL21 LRR_9 LRR_Zer-1 CSTF_C NoBody
Other DBs
NCBI-GeneID: 134000923
NCBI-ProteinID: XP_062296426
LinkDB
Position
19:complement(14233146..14237358)
AA seq 421 aa
MKLQCDVEVVSRMLPTFGMKSRGKGARAVLSIGKHLDKTSQRSSIYMMICTAKDRSGSKY
KLKDNIEKFFTWFVEEGKATVRLKEPAVDICLSKADANSLKNFLSAARLADRGSDTSSLP
LSTLTPVRARDVEQPKKKLTIVSKKDYPLTSNFPYSLEQLQVSYCKLSRVDMRMLSLKAL
RKLDLSNNHIKKLPATIGDLGCLSELILHNNHLEAFSQALCLSTLQRTLQVLDLSQNRLQ
SLPAQFCQLRELVNLKLDDNELVCLPFHIGRLSKLRFLSAAHNQLAVLPGDFRKLSLENL
DLFGNPFIQSNPLDHTMQLTFPLPLQELASRAVANLRIPYGPHLIPAHLCRDLEVAKTCD
CGRVCISFYIKTAVSMNLHQVSHTVVLVDNMGGTDAPVQQHFCSLSCYSEFLDNSLQRGI
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagctacagtgtgatgtcgaggttgttagtcggatgctgcccacgtttgggatgaag
agtcgagggaaaggggcgagagcggtgctttccatcgggaagcatttggacaagacgagt
caacgaagcagcatatacatgatgatctgcacggccaaagacagatcgggctcaaagtac
aagctaaaagacaacatagagaagttcttcacgtggtttgtggaggaaggcaaggccacc
gtgagattaaaggaacctgctgttgacatttgtttgagcaaggctgatgcaaatagcttg
aagaacttcctctcggccgctcgtttggccgacagaggaagtgacacaagcagcctcccc
ctctccacactcactcctgtccgcgccagagacgtagaacaacccaagaagaaactcaca
atcgtttccaagaaggactacccactgacctccaacttcccgtactctctggagcagctg
caggtctcctactgcaaactgtctcgtgtggacatgcgaatgctgtccctcaaagctctt
cgtaagcttgacctcagtaacaaccacatcaagaaactccccgccaccatcggcgacctc
ggctgcctgtctgagctcatcctccacaacaaccacctggaagccttcagccaagccctc
tgtctctccaccctgcagcggaccctccaggttctagacctgagccagaatcgactgcag
tcccttcccgctcagttctgccagctcagagaactggtgaacctcaaactggacgacaac
gagctggtttgtctgccgttccacatcggccgcctctccaagctgaggttcctctcagca
gcgcataaccagctggctgtgctgcccggtgactttcgcaagctgagtttggagaacctg
gacttgtttggaaacccgtttatccagtccaaccctctggaccacacaatgcagctcaca
ttcccccttccgcttcaagagctagcttccagagctgtggcaaacctcagaataccgtac
ggacctcacctcatccccgcccacttgtgtcgggaccttgaagtagccaagacctgcgac
tgtggccgtgtgtgcatcagtttttacatcaagacggcagtgagcatgaacctgcaccag
gtgtctcacacggtggtcctggtggacaacatggggggcactgacgctccggtgcagcag
cacttctgctccctctcctgctactctgaattcttggacaactcgctccagagaggaata
agatga

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