Scomber scombrus (Atlantic mackerel): 134000933
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Entry
134000933 CDS
T10651
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03030
DNA replication
ssco03410
Base excision repair
ssco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134000933 (pole2)
03410 Base excision repair
134000933 (pole2)
03420 Nucleotide excision repair
134000933 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssco03032
]
134000933 (pole2)
03400 DNA repair and recombination proteins [BR:
ssco03400
]
134000933 (pole2)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134000933 (pole2)
DNA replication proteins [BR:
ssco03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
134000933 (pole2)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
134000933 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
PigL_N
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
134000933
NCBI-ProteinID:
XP_062296435
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All DBs
Position
19:11595676..11601433
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AA seq
528 aa
AA seq
DB search
MDVVRKIKTKVCAGFKMRGLILRPEASRYLVEVLESVDSSELEDIIEKVLDAVEKQPLST
SMIELSVVEIAVQDCTQSCDETIDNVFNIIGAFDVPRYIYSTERKKFVPISMTTHPAPSL
CGLARDKAELFRERYTILQQRTHRHELFTPPAIGAVVEEGQNKFQLKTIEALLGSTSKLG
EVIVLGMVTQLKEGKFFLEDPSGTVQLDMSKAQFHNGLYTESCFVLAEGWYEDSVFHVNG
FGFPPTEPSSGTRAYYGNVNFFGGPSTTSVKASAKLKQLEEENEDAMFIIVSDVWLDSVE
VMEKLNLMFSGYAAMPPTCFILCGNFSSVPYGKTQIKSLKESLKALADIICAHPNIHSSS
RFVFVPGPEDPGTSTILPRPPLADHITEEFIQRVPFSVFTTNPCRIQYCSQEIIIIREDL
VNKMCRNCIRLPNNNLDIPNHFVKTILSQGHLTPLPLHVSPVFWAYDYSMRVYPVPDVMI
FADKYDPFSITSSDCLCVNPGSFPKSGFTFKVYYPSNRTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgttcgcaaaataaagacgaaagtgtgcgctggattcaagatgcgaggactt
atactacgacctgaagccagcaggtaccttgtggaggtcctggagtctgttgattcctct
gaactggaggatattattgaaaaggtcctggatgcagtggaaaagcaaccgttgtccact
agtatgatcgagctgtctgtggtggaaattgcagtgcaggactgcactcagtcttgtgat
gaaaccatagataatgttttcaacatcattggagcctttgatgttcccagatacatttac
agtacggagcgtaaaaaatttgttcccatcagcatgacgactcatccggccccgagtctg
tgtggtttggccagggacaaagctgaactgttcagggagcgctacacaattttacaacag
cgtacacatcggcacgagctcttcaccccacctgcaataggagctgttgttgaagagggt
caaaacaaatttcagctgaagacaattgaagcactacttggtagcacatctaaactggga
gaggtgatcgtactcgggatggtcacacaactaaaggagggtaaattcttcctggaggac
ccaagtggaacagtacagctggacatgtccaaagcacagtttcataacggcctatacaca
gaatcctgctttgtcttggcagagggttggtacgaagactctgttttccacgtcaatggt
tttggattcccaccaacagagccttcatcaggcacgagggcttactacggcaatgttaac
ttctttggaggtccgtccaccacttcagtgaaggcgtcagccaagctgaagcagctggag
gaggagaacgaggatgccatgtttataattgtctctgatgtgtggctggacagtgttgaa
gtgatggaaaagctcaacctaatgttctcaggctatgctgcgatgcctcccacctgtttc
attttatgtggaaacttctcctctgtgccatatggaaaaacacagatcaaatcactcaaa
gagtcattgaaggctcttgctgatataatatgtgcacacccaaacattcacagcagtagc
cgctttgtgtttgttcctggtcctgaagaccctggtacaagcaccatcctgccaaggcct
cccttggcagatcacatcactgaggagttcatacagagggtgccattttccgtgttcact
actaacccctgcaggatccagtactgcagccaggagatcatcattatcagggaagacctg
gtcaacaagatgtgcaggaactgcatccggttgcccaacaacaatcttgacataccgaat
cattttgttaagaccatcctgtcccagggtcacttgactccactgccactgcatgtcagt
cctgtattctgggcgtatgactactcgatgcgtgtgtacccagtccctgatgtcatgatc
ttcgctgacaagtacgaccccttcagcatcaccagctcagactgcctatgtgtcaacccg
ggctcatttccaaaaagtggctttacatttaaggtgtactacccatccaacagaactgtt
gaggacagcaaacttcaaggactgtaa
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