Scomber scombrus (Atlantic mackerel): 134000939
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Entry
134000939 CDS
T10651
Symbol
ppp2r5ca
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03015
mRNA surveillance pathway
ssco04110
Cell cycle
ssco04114
Oocyte meiosis
ssco04261
Adrenergic signaling in cardiomyocytes
ssco04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134000939 (ppp2r5ca)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134000939 (ppp2r5ca)
04114 Oocyte meiosis
134000939 (ppp2r5ca)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
134000939 (ppp2r5ca)
09158 Development and regeneration
04382 Cornified envelope formation
134000939 (ppp2r5ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
134000939 (ppp2r5ca)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
134000939 (ppp2r5ca)
03036 Chromosome and associated proteins [BR:
ssco03036
]
134000939 (ppp2r5ca)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
134000939 (ppp2r5ca)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
134000939 (ppp2r5ca)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
134000939 (ppp2r5ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
134000939
NCBI-ProteinID:
XP_062296447
LinkDB
All DBs
Position
19:complement(12748967..12764923)
Genome browser
AA seq
525 aa
AA seq
DB search
MLTCNKAGDRMVVDAPNSNGPFQPVALMHFRDVAPAEQEKLFIQKLRQCCVLFDFLSDPL
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNVAKKYIDQKFVMQLLDLFDSEDPRERD
FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
EVMFLNELEEILDVIEPSEFVKVQEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
DNAAKILPIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEK
AKSKEREEAWIKIENLAKSNPQFSMYVDSSDLNSPVAMETDVPLIEDVQRLKKTVEEGAT
QLQHEQRKERPMVRRKSELPQDIYTTKALESHRRAEDMLTTHDGL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatgcaataaagctggagacaggatggttgtggatgcacctaattccaatggg
ccttttcagccggtggctcttatgcacttcagagatgtggcccccgcagagcaggagaag
ctcttcatccagaagctacggcagtgctgtgttctttttgacttcctgtccgacccgctg
agcgacctgaaatggaaggaggtgaagcgggcggcgctcagcgagatggtggagtacatc
acccacaacaggaatgtcatcacagagcccatctacccggaggtggtgcacatgtttgct
gtgaatatgttcagaacattgcctccatcgtccaaccccactggagcagagtttgaccca
gaagaagatgagccaacacttgaagctgcgtggccacacctccagctcgtctatgaattt
ttccttaggtttttagaatcgcctgactttcagcctaacgtagcaaagaaatacattgat
cagaaatttgttatgcagctcctagacctatttgacagcgaagatcccagagagagagac
ttccttaaaactaccctccacaggatctatggaaagtttctggggctgagagcatacatc
agaaaacagatcaataacattttctataggtttatctacgagacagagcaccataatggt
atagctgaactactggaaatacttggaagcataatcaatggatttgccttaccactaaaa
gaagagcacaagattttcctgttgaaggttttattgcctctgcacaaagtcaaatcactc
agtgtctaccatccacagctggcctactgcgtggtgcagtttttggaaaaggacagcact
ctaactgagccggtggtaatggctcttctaaagtactggccaaagactcacagtcctaag
gaagtgatgttcctcaatgagctggaggagattctggatgtcatcgagccctctgagttc
gtaaaggtgcaggagcctctcttcagacagctggccaagtgtgtgtcaagcccgcacttc
caggttgcagagagagctctgtactactggaacaacgagtacatcatgagtctgattagc
gacaacgcagctaagattctgccgattatgttccccgctctgtaccgcaactcaaagacc
cactggaataagaccatccacggcctcatttacaacgctctgaagcttttcatggagatg
aatcagaagctctttgatgattgcacacagcagttcagggctgagaaaaacaaagagaag
gcaaagtcaaaagaacgcgaagaggcttggatcaagatcgagaacctcgccaaatcaaac
ccacagttctctatgtatgttgattcctctgacctcaatagtcctgtagcaatggagacg
gatgttcctttgatagaagatgttcagaggttaaaaaagacagttgaggagggcgcgact
cagttgcaacatgagcagcggaaagagcggcctatggtgcgacgcaaatctgagttgcct
caggatatctacaccacaaaagccttggagtcccaccgcagagctgaagacatgttgacc
acccacgatggactctag
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