Scomber scombrus (Atlantic mackerel): 134000953
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Entry
134000953 CDS
T10651
Symbol
tmc8
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
134000953 (tmc8)
03037 Cilium and associated proteins [BR:
ssco03037
]
134000953 (tmc8)
Transporters [BR:
ssco02000
]
Other transporters
Pores ion channels [TC:
1
]
134000953 (tmc8)
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
134000953 (tmc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
134000953
NCBI-ProteinID:
XP_062296468
LinkDB
All DBs
Position
2:complement(10089260..10097162)
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AA seq
722 aa
AA seq
DB search
MEERNDVSLMRLLSEESACSTVSSDTYEYYQTEIFDQLPSIQATRPEQNRSEEQLEHGNL
SRGPRDKASTVPLRNLAVCIQAKRDARERRKMQISNIGFWESWRRSQTSSRKRVWAQMGG
AIASLLPWQHTLHAIEGRLGVGVKAYFVFLRYLIFLNVLYCALILGFILGPTIFYGRGSN
SELLRFGGNDSVLDFILGSGYLDRSPVFYSFYTRGSLDLFCLNTPLLYLAGIFAILFLSV
MMVVRRTIVGYKHTWMLGRRHRMNVSYKIFCGWDFTIQYHAAAKLKGSFIRNDIKLFLEE
QNFSMREAKRTLKQWAHLYLLRVTLNLLVLSLLGGAFYLIHFATVKSQSTVATNDPLVKL
LLQYLPPITITFINLFLPHVFRKISSFEDYSFTMQVNATLVRSIFLKLASLGIYLYFVII
GPPVGPVSXHEHTEHTLNKTLSTKXCCLSLIQNSPPKCRENQFGREMYKLCIFNFLITFC
NTFFLNYPRKLLRKKYPSSFLARLLGKQHFLIPFNVLDLVYAQTVSWVGVYYCPLLPLIG
TITLIVTLYIKKFMVLHCCEAEQRMFRASSSSVLFYFMLLLGLLMATVTLGFDLYNFTSK
DSFSCGPFGEGRTVFNVTEECVLSLPSPAQSTLRYLASEAFAIPLILAEIIILTSYVSRG
RANQKAIERLKDMLVMSSSDKRFLVKEHTTMVRRQRNPHQARSARIEENVPLNRHKDPPP
RN
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgcaacgatgtcagcctcatgagacttttatcagaggagagtgcttgttcc
accgtgtcctcggacacctatgagtactaccagacagagatatttgaccagctgcccagc
atccaggctacccggcctgagcagaacaggtcggaggagcagctcgagcatggcaacctg
tccaggggacccagagacaaggcgtctacagtgccgctcaggaacctggctgtgtgtatt
caggcgaagagagatgccagggaaaggaggaagatgcaaatcagcaatattggtttttgg
gagtcctggaggcggagccagactagcagcaggaagagggtgtgggcacagatgggagga
gctatagcaagcctgttgccatggcagcacacactccatgccattgaaggcaggttgggt
gtaggcgtgaaggcctactttgttttcctcagatatctgattttcttgaacgtactctac
tgtgctctcatattgggtttcattctggggcctacaatattttacggcaggggcagcaac
agtgaacttttgaggtttggaggcaatgactcagttttggatttcatcttgggatcgggt
tacctggatcgttctccagtgttctacagcttctatacgcgtggttccctggatttgttt
tgcttgaatacacctctgctgtacctcgctggaatcttcgccatcctcttcctcagtgtc
atgatggtggtccgcagaacgatagttggctacaagcacacatggatgcttggaaggcgt
cacagaatgaatgtgagctataagatcttctgtggctgggacttcaccatccagtaccat
gctgcagcaaaactcaaaggcagtttcatcagaaacgatatcaagctatttctggaggag
cagaatttctccatgcgtgaggctaagaggacactcaaacagtgggcgcatctctacctg
ctcagggtcaccctcaacctgctcgttctgtctctgctgggtggagccttctaccttatt
cactttgccacggtcaagtcacagtctacagtggctacgaatgacccgctggtaaaactg
ctcctgcaatacctccctcccatcaccatcaccttcatcaacctattcctccctcacgtc
ttccgtaagatctcgtcttttgaagattactcgttcacgatgcaggttaatgccaccctc
gtgaggagcatcttcttgaagctggcctccttggggatctacttatattttgtcatcata
ggacctcctgtcggaccagtgagttgacacgaacacactgagcacacattgaataagaca
ttaagcacaaagtaatgctgtctgtccctgattcagaattcaccaccaaagtgcagggag
aaccagtttggtagagagatgtacaagctttgcatcttcaacttcctcatcactttctgc
aacaccttcttcttgaactaccccaggaagctgctacgaaagaagtacccctcatctttc
ctggcccggttgttagggaaacaacacttcctgatccccttcaatgtgctggatctagtg
tacgctcagacagtgtcctgggtgggagtctactactgccctctgctgcctctaatagga
accataacactgatagtgacactctacatcaagaagttcatggtgctgcattgctgtgag
gcagagcagagaatgtttcgagcctccagctcttcggttttattctacttcatgttgctg
ctcggcctcctcatggctacagtcacgctgggcttcgacctctacaatttcacctccaaa
gattctttttcttgtggtccatttggagaaggaagaactgtgtttaatgtgacagaagag
tgtgtgctcagtctcccttcaccggcacagtccactctccgctacctggcttctgaggcc
tttgccataccgctcatactagctgaaattataatcttaacctcatatgtgtcacggggg
cgagccaaccagaaggccattgagagactgaaagatatgctggttatgagcagttcagat
aagcgtttcctggtgaaagagcacaccacaatggtcagacgtcaaaggaacccccaccag
gcccgctctgcacgcattgaggagaacgtccccctcaacagacataaagaccccccacca
cgcaattaa
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