Scomber scombrus (Atlantic mackerel): 134000962
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Entry
134000962 CDS
T10651
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000962 (lingo2b)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134000962 (lingo2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
LRR_5
Ig_2
ig
LRR_Zer-1
LRR_EndoS
LRR_9
V-set
LRRNT
LRR_6
Sp38
Motif
Other DBs
NCBI-GeneID:
134000962
NCBI-ProteinID:
XP_062296476
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Position
19:complement(20228578..20230446)
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AA seq
622 aa
AA seq
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MTEGNVGKRDMQHPALHYNHLFLGGALLLLLASSALSCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRIITPDNFSSFQQLEDLDLSDNLISVVEPGSFRSQLALRSL
NFRSNLLQLVPAGVLSGLTNLTRLDLSHNRLVVLLDHAFQDLRRLTSLEVGDNELVFVSQ
RAFTGLLGLQSLTLERSNLTIVPTDALAHLHSLVELHMRYLSISFLKPFSFKRLSRLRRL
EIDYWPWLDTLPPLSLHGLNLTTLFITNTNLSAFPGTALRNLPYLTHLNLSYCHIQHIHQ
GELGQLPYLMELRLQGAHLISIEPFAFVGLKSLQLLDVSQNRLDSLERGVFASPDSLQRL
CLGGNPLVCDCRLLWLLNSHKPPSLQILDVQPECSAPEHLMGKTIRDLKEPLVSRYMTCT
KPRIGPNTTQLLMADEGQPARLSCMADGAPRPTVVWITPHRRYITAKSSGRVEVQPDGSL
EIKAAELHDSGVYLCIASNPAGNASLSASLAVKSLGIGDRSHYINRSSNYLSDSNSTLGN
GTVLYNMTVPIDLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRK
SNGAAAEASETSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggcaacgtgggtaaaagagacatgcaacacccagccctgcactacaaccac
ctcttcctgggcggggccttgctgcttctcctggccagctcagctctgagctgccccgcc
cgatgtgagtgctctgcccagagcaagtcggtgagttgccaccgcaagcgcctgcccacc
atccctgaaggcatccccattgagacacgcgtcctggatctcagcaagaacaagctacgc
atcatcacaccagacaacttctcttcattccagcagctagaagacctggatctcagcgac
aacctcatcagtgtggtcgagcctggctcatttcgttctcagcttgctctccgttcgtta
aacttccgcagtaacttgctccagctggttcctgcaggtgtcctgtcaggcctgaccaac
ctcacccgccttgacctcagccacaaccgactggttgttcttctggatcatgccttccaa
gatctgcgcaggttgacatctctagaagtgggtgacaacgaattggttttcgtctcccag
cgggccttcacaggattacttgggctccagagtctgacgctggaacgttctaatctgacc
attgtccctactgatgctctggcacatctgcacagcctggttgaactgcacatgcgctat
ttgagcattagttttcttaagcctttttcctttaagaggctgtcacgtctccgccgacta
gagattgattactggccctggctggacacactgcctcccctctcactgcatggcctcaac
ctcacaacgttgttcataaccaacactaacctgtctgccttccccggcacagcattgcgc
aatctgccctacctcacacatctcaacttgtcctactgccacatccagcacatccatcaa
ggagagctaggccaactcccatatctgatggagctccgtctccaaggggctcatctgatt
tctattgaaccctttgcatttgtgggcctcaaatctttgcaactactagatgtgtcacag
aaccgactggactctctggagaggggagtgttcgcctcaccagacagcctccagaggctt
tgtctgggtggaaatccattagtgtgcgactgcagattgctttggttgctgaatagccac
aagcccccatccctgcagattctggatgtccagcctgagtgcagcgcccctgagcacctc
atgggaaaaactatccgtgacctcaaggaacctctggtctccaggtacatgacctgcacc
aagccacggattggacccaacacaacacagctgctgatggctgatgagggtcagcctgcc
cgcctgagctgtatggcagatggagcacctcgacccacggtggtctggattacaccgcac
agacgctacatcacagccaagagcagtggtagggtggaagtccaaccagatggttccctg
gaaatcaaggcagcagagctacatgacagtggggtgtacttatgtattgccagtaaccct
gctggcaatgctagcctgtcagcctctttagcagtgaagagcctgggcataggggacaga
tctcactatatcaacaggagctcaaactatctctcagattctaacagcactttggggaat
gggacagtattgtacaacatgacagtccccatagacttaaagactatcattatatctaca
gccatgggctgcctgtccttcctaggtgtggtcatcttctgcttcctgcttctgtttgcc
tggagtcgagggaaaggacgccataagagcaactttgatattgagtatgtcccacgcaaa
tccaacggggcagcagctgaagcgtcagaaacaagtggccccagacgggtcaatatgaaa
atgatttga
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