Scomber scombrus (Atlantic mackerel): 134000982
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Entry
134000982 CDS
T10651
Name
(RefSeq) zinc finger FYVE domain-containing protein 1-like
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134000982
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
134000982
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000982
03029 Mitochondrial biogenesis [BR:
ssco03029
]
134000982
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134000982
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
Others
134000982
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
134000982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
ANCHR-like_BBOX
GBP
AIG1
MMR_HSR1
zf-B_box
Msb1-Mug8_dom
Motif
Other DBs
NCBI-GeneID:
134000982
NCBI-ProteinID:
XP_062296495
LinkDB
All DBs
Position
19:16527447..16538406
Genome browser
AA seq
786 aa
AA seq
DB search
MSGHGSSSQKGVNTSLICQESYACGGAEEAAFECYECKSLQCVRCELELHNQESLKNHER
VQISPGHVPYCDNCKGGNGDSGKRHRSVVRCQNCKVNLCQDCQKRTHSGGNRKKHQLTSY
PPPPKPAEVSSVQTSVQPVVQVVDETKSQRAKLLEKITSFLLVDENEEMQIKDDAPFVKR
LNCPPDQLLKVVSIFGNTGEGKSHTLNHTFFMGREVFKTSPTQESCTVGVWAAFDPIHKV
VVIDTEGLLGNSSKQGQRTRLLLKVLAISDLIIYRTHADRLHDDLFKFLGDASEAYLKHF
TKELKATTARCGLDVPLSTLGPAVVIFHETVHTKLLGSDKSSESVDRLLLERFRKLSRFP
EAFSSVQYWGTQTLSPPTDFRGLQSKLEQLLDNNATRSPRTPVVIFKALQALSERFNGEI
GDELVAHSCFFPDEYFTCSSLCLSCGSGCKNSMNHLAEGVCHEERHRCRYSVQYDNRIYT
CKACYEGGKEVLVVPKTSASSDSPWMGLAKYAWSGYVIECPNCGVIYRSRQYWYGNQDPV
DTVVRTEIQHVWPGSDGFLKDNSNAAQRLLDGVNLVAQSVSELSVKPAKAVTSWLTDQIA
PAYWKPNSLIMVCHKCHEVFQDNDTKHHCRACGEGFCDGCSSKAAPVPERGWGLAPVRVC
DICFEQRASYAELLEAELEEEEGGTLARKVGEAVTNTIGVVVTAIDIPLGLVKDAARPAY
WVPDQDILSCHNCQREFTAKLSKHHCRACGQGVCDDCSPERRPVPSRGWDHPVRVCTSCN
QKPGEL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccatggctcatcttcacaaaagggagtcaatactagtctaatatgtcaagag
agttatgcctgtggtggcgctgaggaagctgcatttgagtgttatgaatgcaaaagcttg
cagtgtgttcgttgcgagcttgagctccacaaccaggagtctctcaagaaccatgagcgg
gttcagataagtccagggcatgtcccttactgtgacaactgtaaaggaggtaatggagac
agtggcaaacgccataggtctgtggtccgctgccagaactgcaaagttaatttgtgccaa
gactgtcagaaacgcacccacagtggaggcaacaggaagaaacaccagcttacatcttat
cctccaccaccaaaacctgccgaggtcagctctgtccaaacatctgtgcagcccgttgtc
caagtagtcgatgagaccaaatctcagagagcaaagctcctggagaagataaccagtttt
ctcctggttgatgagaatgaggaaatgcagataaaagatgatgctccatttgtaaagagg
ttgaactgcccccctgaccagctgctgaaggtggtgtccatctttggtaacacgggagag
ggcaaatctcacaccctgaaccacacattcttcatgggcagagaagtgttcaagacctct
cccacacaggagtcctgtacagtgggtgtgtgggcagcgtttgatcctatccataaagta
gtggtcatcgatacagagggtctgcttgggaacagttccaaacagggccagagaacccgt
ctcttgctcaaggtgctcgccatctctgacctcatcatctaccgcacccatgctgaccgt
ctccacgacgacctcttcaaattcctcggggatgcctctgaggcctacttgaagcatttc
actaaggaactgaaggccacaacagcccgctgtggcctggatgtcccactgtccaccttg
ggcccagctgtggtcatcttccatgagacagtccacactaagttgcttggttcagataag
tcgtccgagtcagtagatcggctgctgttggagcgcttcaggaagctttctcgtttccca
gaggccttcagttctgtccagtactggggcacacagactctgagcccccctactgacttt
cgtggcctacagagtaaactggagcagctcctagataacaacgccacccgttccccacgc
acccctgtggtcatcttcaaagccctgcaggcattaagtgagcgcttcaatggagaaatt
ggagatgagctggtagctcacagctgcttttttcctgatgagtacttcacttgctccagc
ttgtgcctcagttgtggatctggttgcaagaacagcatgaaccacctagcagaaggagtg
tgccatgaggagaggcatcgttgtcgttattctgttcagtacgataatcgcatttatacc
tgtaaggcttgctatgaaggggggaaggaagtgctagttgtcccaaagacctcagcatct
tcagactctccatggatgggtcttgccaaatacgcctggtctgggtatgttattgaatgt
cccaactgtggagtgatctatcgaagccgtcagtattggtatgggaaccaggaccctgtg
gatacagttgtccgcactgagatccagcatgtatggccagggtcggatggctttttaaag
gacaatagcaatgcagcgcagcgtcttttggatggagtcaacttggtagcccagtctgtg
tcagagctcagtgtcaagcctgccaaggccgtcacctcttggctgacagatcagatcgct
ccagcctactggaaacccaactccctcatcatggtgtgccataagtgtcatgaagtcttc
caggacaacgacaccaagcatcactgccgtgcctgtggagagggcttctgtgatggctgc
tcttccaaagctgcaccagtccctgaaagaggctggggtcttgcccctgtcagagtctgt
gatatctgctttgagcagagagcttcatacgcagagcttcttgaggcagagcttgaggag
gaagaaggcggaacgctcgccaggaaggtcggagaggcagtgaccaacaccataggggtt
gtagtcactgctattgacatcccacttggtctagtgaaagacgcagcccgtcctgcctat
tgggtgcctgatcaggacatcctgtcctgccacaactgccagcgtgagttcactgccaaa
ctgtccaagcatcactgccgtgcctgtggccaaggagtgtgtgatgactgctccccggag
cgtcggccggttccatcgcggggctgggaccaccccgtgcgtgtgtgcaccagctgcaac
cagaaacctggagaactttaa
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