Scomber scombrus (Atlantic mackerel): 134001009
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Entry
134001009 CDS
T10651
Symbol
esr2b
Name
(RefSeq) estrogen receptor 2b
KO
K08551
estrogen receptor beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
134001009 (esr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134001009 (esr2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
134001009 (esr2b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
134001009 (esr2b)
Nuclear receptors [BR:
ssco03310
]
3. Estrogen like
3A. Estrogen receptor
134001009 (esr2b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
zf-C17orf113
ANTH
AAA_SpoVK_N
Motif
Other DBs
NCBI-GeneID:
134001009
NCBI-ProteinID:
XP_062296528
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All DBs
Position
19:2187716..2209676
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AA seq
640 aa
AA seq
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MADCLMMASSPGLDVDPLPMLQLQEVDSSKISEKLSSPGLMPGMYSPPLGMDNHTVCIPS
PYTDSSHEYNHGHGPVTFYSPSVLSYARPSINDSPSSLCPPLSPSALWPSHNHPNLPSLP
LRCPQPLVYSEPNPHTAWLEPKAHSINTSSSIINCNKLMGKRSEEGLEGVNSSSAVGKAD
MHFCAVCQDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR
LRKCYEVGMMKCGVRRERCSYRGARHRRGGIRSRDQTGRGLVRVGQRHIHLEAPLNPLHH
GNQAHHSVMSPEEFISRIMEAEPPEIYLMEDLKKPFTEATMMMSLTNLADKELVLMISWA
KKIPGFIELSLADQIHLLKCCWLEILMLGLMWRSVDHPGKLIFSPDFKLNREEGQCVEGI
MEIFDMLLAATSRFRELKLQREEYVCLKAMILLNSNLCTSSPQTAEELESRNKLLRLLDS
VIDALVWVISKMGLSTQQQTLRLGHLTMLLSHIRHVSNKGMDHLSTMKRKNRVLVYDLLL
EMLDANTSGGSSSSSQMSASSPDSDSFCEQQQYVQPPPHMHHGTDQTTAEPPFGPAEALI
LDRHLKASPLQSSPPPLSLMVDHMTAEGNDYIHTETWSLE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcagattgcctcatgatggcgtcctctcccgggctggacgttgacccgttaccaatg
cttcagctccaggaggtggactccagcaaaatctcagagaagctgagctccccaggactg
atgcccggcatgtacagccctcctctgggcatggacaaccacactgtctgcattccctct
ccgtacacggacagtagtcacgagtacaaccacggacatggacctgtgaccttctatagc
ccgtcagtgctgagctatgcccggccgtccatcaatgacagtccttcatctctgtgcccg
cccctcagcccgtcggccttgtggccatcacacaaccaccccaacttgccctcgttgccc
ctgcgctgccctcagcctctcgtctacagcgaacccaacccacatacagcctggctggag
ccgaaagcccacagcatcaacaccagcagttccatcatcaactgtaacaagctgatgggg
aagagatcagaggaaggattggaaggcgttaactcttcatccgccgtggggaaagctgac
atgcacttctgcgctgtgtgccaagactacgcctccgggtatcactacggcgtgtggtcc
tgtgaaggatgcaaggcttttttcaagaggagtatccaaggacacaatgactacatctgc
cccgccacaaaccagtgcactatcgacaagaaccggcgtaaaagctgccaggcctgtcgc
ctacgtaaatgctacgaagtgggaatgatgaagtgtggtgtgaggcgtgaacgctgcagc
taccgaggagcccgacaccgccgtggtgggattcgttcccgggatcaaacaggcaggggt
ttggtcagggtggggcagcggcatatccacctggaggcaccgctcaacccgctccatcac
ggcaaccaagcgcaccactcagtcatgagcccggaggagttcatctcccgcatcatggag
gccgagcctccggagatttacctcatggaagatctgaagaagccgttcactgaagccacc
atgatgatgtcactcaccaacctggctgacaaggagctcgtcctcatgatcagctgggcc
aaaaagattccaggctttatagagctcagtctagcggatcagatccacctgctgaagtgc
tgctggctggagatcctgatgctgggcctgatgtggaggtctgtggatcatcctggaaaa
ctcatcttctctccagacttcaaactcaacagggaggagggacagtgcgtggagggcatc
atggagattttcgacatgctgctggcagccacgtctcggttccgcgagctgaagctgcag
agagaggagtacgtctgtctcaaggccatgatcctcctcaactccaatttgtgtacgagc
tccccgcagacagccgaggagctggagagcaggaacaagctgctgcgtctgctggactcg
gtgatcgacgctctggtctgggtgatttccaaaatgggcctgtcgacccagcagcagact
ctgcgcctcggacatctcaccatgctgctctcccacatccgccacgtcagtaacaaaggc
atggaccatctgtccaccatgaagaggaagaacagggttctggtgtacgatctcctcctg
gagatgctggacgccaacacatccggcggcagcagcagcagcagtcagatgtctgcgtcc
tcgccagactctgactctttctgcgagcagcagcagtacgtccaaccccccccacacatg
caccacggcacagaccagaccaccgcagagcctccattcggaccagctgaggctctgatc
ctggacagacacctgaaggcttcgcccctccagtcctcacctccgcctctgagtttaatg
gtggatcacatgactgcagagggaaatgattacatccatacggagacgtggtcactggaa
tag
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