KEGG   Scomber scombrus (Atlantic mackerel): 134001030
Entry
134001030         CDS       T10651                                 
Symbol
chrnb5a
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
  KO
K04813  nicotinic acetylcholine receptor beta-2
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080  Neuroactive ligand-receptor interaction
ssco04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    134001030 (chrnb5a)
   04082 Neuroactive ligand signaling
    134001030 (chrnb5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssco04040]
    134001030 (chrnb5a)
Ion channels [BR:ssco04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   134001030 (chrnb5a)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD DUF2754 DUF2417
Other DBs
NCBI-GeneID: 134001030
NCBI-ProteinID: XP_062296553
LinkDB
Position
2:complement(8122428..8134033)
AA seq 508 aa
MSINTVLLLFILSLTCSRAENAEERLVNYLLGPERYNKLIRPAVNKSQQVTISIQVSLSQ
LISVNEREQIMTTNLWLFQEWNDYRLRWDPDKYEGIKKLRIPSKHIWLPDIVLYNNADGV
YEVSFYCNAVVSNTGDIFWLPPAIYKSACAIEVQNFPFDQQNCTLKFRSWTYDHTELDLI
LTSDFASRDDFTPSGEWDIVSLPARKNEDPNDITYLDITYDFVIQRKPLFYTINLIIPCV
LITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMV
LVTFSTVSTVCVLNVHHRSPSTHHMPDWVNRIFLVTLPTFLFMRRPGSSNVRDKLRRKYA
NQNTTNKNNSQSGRERKSCSNIKLGGIRTDADSFYVNEDLAHRFCWKVGDIPDGGGGFSD
FRRPLGSQWDADLEEAVEGVKYISEHMKTEDDDEGIIEDWKYVAMVIDRLFLWIFILVCV
VGTLGLFMQPLFQSYNTPIADETEYGDF
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgagtatcaacactgttctcctgctcttcattctctctctcacatgcagcagagcagag
aatgcagaggagcggctggtgaactacctgttgggtccggagcgctacaacaaactgatc
agaccggctgttaacaagagccagcaggtcaccatctccatacaggtgtctctgtctcag
ctcatcagtgtaaatgagcgtgaacagatcatgacgaccaacttgtggctgtttcaggag
tggaatgactacaggctgaggtgggacccagacaagtacgaaggcatcaagaaactacga
ataccgtccaaacacatctggcttcctgatatagtgctttacaacaatgctgatggcgtg
tacgaagtttccttctattgcaacgccgtggtctccaacacaggagacatcttttggctc
cccccggccatctacaagtcggcctgcgccatcgaagtgcagaacttccccttcgaccag
cagaactgcactctcaaattccgctcctggacctacgaccacacagaactggacctgatc
ctcacgagcgactttgccagccgagatgacttcacccccagcggagagtgggacatcgtc
tcgctcccagcacgcaaaaacgaagaccctaacgacataacttaccttgacatcacctat
gattttgtgattcagaggaagccgctgttttataccattaatctgatcatcccgtgtgtg
ctgatcacgtcgctggctatcctggtgttctacctgccgtcggactgcggggagaagatg
acgctgtgcatctcagtgctgctggcgctcactgtgttcctgctgcttatttcaaagata
gtgccacccacctctctagcagtaccacttattggtaaatacttgatgttcaccatggtg
cttgtcactttctccactgtgagcacagtgtgcgtcctcaacgtgcaccaccgctcacca
tccacccaccacatgcccgactgggtcaatcgcatcttcttggtcacccttcccactttc
ctcttcatgaggcgtccaggctcttcaaacgtccgtgataagctccgtcggaagtatgct
aaccagaataccaccaacaaaaacaattcccagagcggcagggagaggaagtcttgctcc
aacataaaactcggtgggatccgaacggacgctgactccttctatgtgaatgaggactta
gcacacaggttttgttggaaagtgggagacatcccagacgggggtggtgggttttcagac
ttccggaggcctttgggcagtcagtgggatgcagatctggaggaggcagtggaaggagtg
aaatatatctctgaacacatgaagacggaagacgatgacgaagggataatagaagactgg
aagtatgtagccatggtgatagaccgactgttcctgtggatctttatcctggtgtgtgtc
gtgggaacgctggggctcttcatgcagccgctgttccaaagctataacacgcccattgct
gatgaaaccgagtatggagatttctag

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