Scomber scombrus (Atlantic mackerel): 134001030
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Entry
134001030 CDS
T10651
Symbol
chrnb5a
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134001030 (chrnb5a)
04082 Neuroactive ligand signaling
134001030 (chrnb5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
134001030 (chrnb5a)
Ion channels [BR:
ssco04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
134001030 (chrnb5a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2754
DUF2417
Motif
Other DBs
NCBI-GeneID:
134001030
NCBI-ProteinID:
XP_062296553
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Position
2:complement(8122428..8134033)
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AA seq
508 aa
AA seq
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MSINTVLLLFILSLTCSRAENAEERLVNYLLGPERYNKLIRPAVNKSQQVTISIQVSLSQ
LISVNEREQIMTTNLWLFQEWNDYRLRWDPDKYEGIKKLRIPSKHIWLPDIVLYNNADGV
YEVSFYCNAVVSNTGDIFWLPPAIYKSACAIEVQNFPFDQQNCTLKFRSWTYDHTELDLI
LTSDFASRDDFTPSGEWDIVSLPARKNEDPNDITYLDITYDFVIQRKPLFYTINLIIPCV
LITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMV
LVTFSTVSTVCVLNVHHRSPSTHHMPDWVNRIFLVTLPTFLFMRRPGSSNVRDKLRRKYA
NQNTTNKNNSQSGRERKSCSNIKLGGIRTDADSFYVNEDLAHRFCWKVGDIPDGGGGFSD
FRRPLGSQWDADLEEAVEGVKYISEHMKTEDDDEGIIEDWKYVAMVIDRLFLWIFILVCV
VGTLGLFMQPLFQSYNTPIADETEYGDF
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaacactgttctcctgctcttcattctctctctcacatgcagcagagcagag
aatgcagaggagcggctggtgaactacctgttgggtccggagcgctacaacaaactgatc
agaccggctgttaacaagagccagcaggtcaccatctccatacaggtgtctctgtctcag
ctcatcagtgtaaatgagcgtgaacagatcatgacgaccaacttgtggctgtttcaggag
tggaatgactacaggctgaggtgggacccagacaagtacgaaggcatcaagaaactacga
ataccgtccaaacacatctggcttcctgatatagtgctttacaacaatgctgatggcgtg
tacgaagtttccttctattgcaacgccgtggtctccaacacaggagacatcttttggctc
cccccggccatctacaagtcggcctgcgccatcgaagtgcagaacttccccttcgaccag
cagaactgcactctcaaattccgctcctggacctacgaccacacagaactggacctgatc
ctcacgagcgactttgccagccgagatgacttcacccccagcggagagtgggacatcgtc
tcgctcccagcacgcaaaaacgaagaccctaacgacataacttaccttgacatcacctat
gattttgtgattcagaggaagccgctgttttataccattaatctgatcatcccgtgtgtg
ctgatcacgtcgctggctatcctggtgttctacctgccgtcggactgcggggagaagatg
acgctgtgcatctcagtgctgctggcgctcactgtgttcctgctgcttatttcaaagata
gtgccacccacctctctagcagtaccacttattggtaaatacttgatgttcaccatggtg
cttgtcactttctccactgtgagcacagtgtgcgtcctcaacgtgcaccaccgctcacca
tccacccaccacatgcccgactgggtcaatcgcatcttcttggtcacccttcccactttc
ctcttcatgaggcgtccaggctcttcaaacgtccgtgataagctccgtcggaagtatgct
aaccagaataccaccaacaaaaacaattcccagagcggcagggagaggaagtcttgctcc
aacataaaactcggtgggatccgaacggacgctgactccttctatgtgaatgaggactta
gcacacaggttttgttggaaagtgggagacatcccagacgggggtggtgggttttcagac
ttccggaggcctttgggcagtcagtgggatgcagatctggaggaggcagtggaaggagtg
aaatatatctctgaacacatgaagacggaagacgatgacgaagggataatagaagactgg
aagtatgtagccatggtgatagaccgactgttcctgtggatctttatcctggtgtgtgtc
gtgggaacgctggggctcttcatgcagccgctgttccaaagctataacacgcccattgct
gatgaaaccgagtatggagatttctag
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