Scomber scombrus (Atlantic mackerel): 134001032
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Entry
134001032 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134001032
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GFIT
Other DBs
NCBI-GeneID:
134001032
NCBI-ProteinID:
XP_062296555
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Position
19:complement(269265..288035)
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AA seq
1103 aa
AA seq
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MDQCEDREEGVPPSKSSLCGEHDSQTKAQRMQQQRADSPEPSCVSMKSDRSMDHPFNFKD
GQPADGRVQQQSSEVPSDQSAQQHQTQLDSIFMLLEENIVTFVKNELKRVQRDLSPDDPE
CLESQSEDEEELDGEEEEQRRSSREAFLKITLHFLRRMKQEELAELLQSSKKLLFVHSGA
RAAKCRRKLKSNLQKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEIRQIE
TASRKPVRPETTIRQEDIFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFSLDWAEDKANQ
DIHFTFPFTFRQLNVLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLP
LDFLNNKNLTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEIR
GFTDPQKEEYFRKRFRDEEQASTIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSREG
GELPKTLTEMYIHFLVAQSKLKNIKYEGGAETDPHWSPESRKMIESLGKLAFEQLQKGNL
IFYESDLTECGIDIRAASVYSGVFTQVFKEERGLYQDKVFCFVHLSLQEFLAALHVHLTF
IKSGVNLLATSWWSKLITPWWSKLFQDNPEPTHLYQRAVDEALKSPNGHLDLFLRFLLGL
SLQTNQTLLRGLLTQTGSSSQTNQKTVEHIKKKISENVSAERSINLFHCLNELNDRSLVE
EIQQYLRSGSLSTDKLSPAQWSALVFMLLSSDKDLDVFDLKEYSASEEALLRLLPVVKVS
NKALLTVCNLSERSCAALSSVLSSQSSSLRDLDLSNNDLQDSGVKQLSAGLESPHCGLET
LSLSACLITEEGCASLASALSSNPSHLRELDLSYNHPGDSGEKLLSAGLEDPHWRLDTLR
MDHGGLQRLKPGLRKYACELKLDPNTMNILLTLSDNNRKVTRVKKHQSYPDHPDRFDFWW
QLLCSNDLTGRCYWEVEWSGEFEIAVSYRRISRKGNSANCRFGWNDQSWRLDCSDDGYSV
WHNNRETPISSSSSSSSSSSSSSSSSSVSNRVAVYVDCPAGTLSFYRVSSDSLIHLHTFN
TTFTEPLYAGFGLWSGSMSLFPL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaagctcagaggatgcagcagcagagagcagactctcctgaa
cccagctgtgtgtccatgaagagtgaccggtctatggatcatccttttaactttaaagat
ggacaacctgctgatggaagagttcagcagcagagctcagaggttcccagtgatcagtct
gcacagcagcatcaaacacagctggactccatatttatgctgctggaggagaacatcgtc
acttttgtgaagaacgagctgaagagagtccagagggatctgagtccagatgacccagaa
tgcttagagagtcagagtgaggatgaagaggagttggatggtgaggaggaagagcagagg
aggagcagcagagaggcttttctgaagatcacactgcacttcctgaggagaatgaagcag
gaggagctggctgagcttctgcagagcagtaagaagttgttgtttgttcattcaggagct
cgtgctgcaaagtgtcgacgtaaactcaagtctaacctgcagaagaagttccagtgtctg
tttgaggggatcgctaaagcaggaaacccaacccttctgaatcagatctacacaccgctc
tacatcacagagggagggactgcagaggtcaatgatgaacatgagatcagacagattgaa
acagcatccaggaaaccagtcagaccagaaacaacaatcagacaagaagacatctttaaa
gcctcacctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcatt
gggaaaacagtcttaacacagaagttcagtctggactgggctgaagacaaagccaaccag
gacatacacttcacatttccattcactttcagacagctgaatgtgctgaaagagaaaaag
tacagcttggtggaactagttcatcacttttttactgaaaccaaagaagcaggaatctgc
aggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcct
ctggacttcctcaacaataagaacctgactgatgttacagagtccacctcagtggatgtg
ctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccaca
cgacctgcagcagccaatcagatccctcctgagtgtgtcggcatggtgacagagatcaga
gggttcactgacccacagaaggaggagtacttcaggaagagattcagagatgaggagcag
gccagcaccatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatc
ccagtcttctgctggatcactgctacagttctggaggatgtgttgaaaagcagagaggga
ggagagctgcccaagaccctgactgagatgtacatccacttcctggtggctcagtccaaa
ctgaagaacatcaagtatgaaggaggagctgagaccgatccacactggagtccagagagc
aggaagatgattgagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctg
atcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtac
tcaggagtgttcacacaggtctttaaagaggagagagggctgtaccaggacaaggtgttc
tgcttcgtccatctgagccttcaggagtttctggctgctcttcatgtccatctgacattc
atcaagtctggagtcaatctgctggcaacatcctggtggtctaaactgattaccccatgg
tggtctaaactatttcaagacaatcctgaaccaacgcatctctaccagagagctgtggac
gaggccttaaagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctc
tcactgcagaccaatcagactctcctacgaggtctgctgacacagacaggaagtagctca
cagaccaatcagaaaacagttgagcacatcaagaagaaaatcagtgagaatgtgtctgca
gagagaagcatcaatctgttccactgtctgaatgaactgaatgatcgttctctagtggag
gagatccaacagtacctgagatcaggaagtctctccacagataaactgtctcctgctcag
tggtcagctctggtcttcatgttactgtcatcagataaagatctggacgtgtttgacctg
aaggaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagtctcc
aacaaagctctgttgactgtctgtaatctctcagagagaagctgtgcagctctgtcctca
gttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacgacctgcag
gattcaggagtgaagcagctttctgctggactagagagtccacactgtggacttgaaact
ctcagtctgtcagcatgtctgatcacagaggaaggctgtgcttctctggcctcagctctg
agctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactca
ggagagaagcttctgtctgctggactggaggatccacactggagactggacactctcagg
atggaccatggtggactgcagagactgaaacctggtctgaggaagtatgcctgtgaactg
aaactggatccaaacacaatgaacatactcctcacactgtctgataacaacaggaaggtg
acacgtgtgaagaagcatcagtcatatcctgatcatccagacagatttgacttctggtgg
cagctgctgtgtagtaatgatctgactggtcgctgttactgggaggtcgagtggagtgga
gagtttgaaatagcagtgagttacagaagaatcagcaggaaaggaaacagtgctaactgt
aggtttggatggaatgatcagtcctggagactggactgctctgatgatggttactctgta
tggcacaataacagagaaacacccatctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgct
ggcactctgtccttctacagagtctcctctgactcactgatccacctccacaccttcaac
accacattcactgaacctctgtatgctgggtttgggctctggtctggttcaatgtctctg
tttcctctgtag
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integrated database retrieval system
