Scomber scombrus (Atlantic mackerel): 134001047
Help
Entry
134001047 CDS
T10651
Symbol
wdr20a
Name
(RefSeq) WD repeat-containing protein 20
KO
K24741
WD repeat-containing protein 20
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
134001047 (wdr20a)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
134001047 (wdr20a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
134001047
NCBI-ProteinID:
XP_062296565
LinkDB
All DBs
Position
19:complement(11625742..11634250)
Genome browser
AA seq
613 aa
AA seq
DB search
MLISKMAAEGGGKEMNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNV
NDQSGNGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAES
VSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVSHASGNMY
LYNVEHTCGTTAPHYQMLKQGENYSVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFL
ACVSQDGFLRVFNFDAVELHGTMKSYFGGLLCVCWSPDGKYIVAGGEDDLVTVWSFLDCR
VIARGHGHKSWVSVVAFDHYTTSVEESDPMEFSGSDEDFQDQMIHFGRDRANSTQSRLSK
RNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNATSPPAGAT
IITNTSSNTTNGNNSGANTPGINSLSTTLPRSNSLPHSAGTTTTANNTNKAGSGGGISSG
IMDSSIATGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLLTKTKTDPAKT
LGTLLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCLVTACQEGFICTWARPGKVGLLS
SQNQASSPSGTVV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttaatttcaaagatggcggcggagggaggagggaaggagatgaacgaaattaaaact
cagttcaccactcgggaaggcgtctacaaactcctcacccactccgaatacagccgtccc
aacagagtgcctttcaactcgcagggctccaaccccgtcaaggtctccttcgtgaacgtc
aacgaccagtcgggcaacggcgacaggatctgtttcaatgtgggccgtgaactctacttc
tacatctacaaaggcgttagaaaggctgctgacctgagcaagccgatagacaagcgcata
tacaagggaacgcagcccacctgtcatgacttcaaccacctaacggcaacagcagagagc
gtgtctttgctggtgggtttctcagcaggacaagtgcagctcatcgacccaatcaagaag
gaaacgagcaagcttttcaatgaggagagactaatagacaaatctagagtaacatgcgtg
aaatgggtgccgggctctgagagcctgtttctggtctctcatgccagtgggaatatgtac
ctgtacaatgtggagcatacttgtggcaccacggcaccgcactaccagatgctcaaacag
ggagagaactactctgtacacacttgtaagagtaaatctacaaggaaccctctcttaaaa
tggacagtgggtgagggggctctgaatgagtttgctttctctccagatgggaagttccta
gcctgtgtaagccaagacggcttcctacgggtgttcaacttcgacgctgttgagcttcat
ggcaccatgaagagctactttggtggcttattgtgcgtgtgctggagccctgatggaaag
tacatagttgcgggtggagaggacgacctagtgactgtgtggtcgttcttggactgcaga
gtcatagcccgaggtcacgggcacaagtcatgggtgagtgtggtggcatttgaccactac
actaccagcgtggaagaaagcgaccccatggagttcagtggtagtgacgaggacttccag
gatcagatgatccacttcggacgagaccgggccaacagtacgcaatctcgactctccaag
cgcaactccacggacagccggcctgttagtgtcacataccggtttggctcagtgggccag
gacactcaactgtgcctatgggacctcactgaggacatccttttcccccatcttccactc
tcacggacacggacacacactaacgtgatgaacgctaccagcccccctgcgggtgctaca
ataatcactaacacctctagtaacactactaatggaaacaacagtggtgccaatactcct
ggcattaactccctctctaccacattaccacgctccaacagtctaccccattcagccggc
accacgacaacggcaaacaataccaacaaggctggcagcggtggtggcatcagcagcggg
attatggacagttccatcgctacaggtgtgagtaaatttgccactctgtcactccacgat
cggaaggagcgccaccatgagaaggaccacaaacgcaaccacagcatgggtcacatcagc
agcaagagcagcgacaagctcaaccttctgacaaaaaccaaaacagaccctgctaagact
ctgggcactctgctgtgcccacgcatggaggacgtgcccctccttgagcccctcatctgt
aaaaagatagcacacgagaggctcactgtactcatatttttagaggactgtttagtgact
gcttgtcaggagggatttatttgcacatgggcgaggccaggcaaagtgggtttattgtca
tcccaaaaccaagccagctctcccagtggaacagtagtatag
DBGET
integrated database retrieval system
