Scomber scombrus (Atlantic mackerel): 134001054
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Entry
134001054 CDS
T10651
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Other domain-containing proteins
Tubby family proteins
134001054 (tulp4b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134001054
NCBI-ProteinID:
XP_062296574
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Position
19:7310558..7320655
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AA seq
1738 aa
AA seq
DB search
MLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDSTESDTDSDDNILP
LVRRVKPLLTVTFLSGDISLMNNYDDLSPAVIRSGLKDVEAQWCSQGDLLAVAGMERHGL
PVDSACGPIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLFLACGPALYVVR
VEHRVASLQLLCQQGIASALREEKDVGKLNMPSLLCSYVTTAFIPTIKPPIPDPNNIRDF
VSYPTAGNERLHCTMKRAEDSPEAGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDSKAEEVCVNPMISYTDSCNCSDSSDIELSDEWVGKKSPKLSRGNRSPKLQRMNMDSR
KSPKLSRANQEGQRSPRLPTKKPPIRSPSLTRREFSMDGITEHNYLAQVTSNIWGTKFKI
VGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISHDFMSLPVFNPNVFSEDEDDL
PVMGPSGVAGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNIQLDVLTNPTAT
AAAAAAAAAASVPVSDHGQDAVATPYPVPARYSNPGQVIFNGLEMGPLLPGTLPPPPPPH
HHHQSQSQQQQQQMQQQHQQLQQLHHQQQQLQQQQQQHQQQQQQQHQQQQQHQQHHQQQQ
QIRQQIQEMRHQQQQLQQQHQQIQQQHQQMQRQHQQMQQQLKMQMSLPPPPTGYPTISLQ
QIHLLPQILPGNPPPTTEPGLDRGDHGHMLKPSLPRTLPPSFSDADGSMEIQMRKVNPPP
PYPGTVVSAAATTATAAATPQTLVTNCDSPSILAPDPFLKKDEFLLHPVTLQYPTPLGYE
RITTFDSSGNVEEVCRPRRRLIRNQNAYTVHGIGGSATLKVTSSDSKKIQLPYSSATLSR
LSVPRYSIPSGDPPPYPDPANQVTTTLPPPQRIDNSLIHATIRRDRRDMGLKVPQMMDSS
RTLPTKAKMNSALALSYQQRVPTALYTCTQCSSNSSSTSVSVSGGGTTSSGIAGGTVVRQ
EFPPGKGAHHSTIIVHSKSASPLASQSSYSLLSAVDNSRDRTVYVNSAFTEDETLNQQCH
LEKSVRQLTLGDVSLTVKRPPPYQWDPSTTEEFWLTPEQTILAPPPGPHKPPPLIISQAQ
HLDMTRLPFVLTTKPPSSPSTSTLTFPSGYQISLSPFPPGVGHSGPQLQTLQNPPPQCSP
NEVVGPVPFAQQDPNLVLPPGYPPNLANLACCPLPPMYPGASSCAGLQLHPVNLHPWNPY
PCPPPMQDPPAPPLPTKTHQILEKPILSPPPPTGPPPPPPLPPPPPPTELPPSKSATEDL
AESANNFAEPSSLNESPVPQESDRFNKKSRKRLDSRAEEANLPTVAEGKSRKEGRALSDF
NTLISSPRLGSREKKKPKGPREQLNKTKKMSRTTNEFQDSSESEPELFISGDELMNQNQS
SKKSWKNKRSLRMASELEEIKCRKANEREDRSLGSQGFVYVMANKQPLWNEATQVYQLDF
GGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVSLANVTQRLK
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgttggctgccgtggaacatggtcccatcctctgcagtgactccaacatcctctgcctc
tcatggaaaggccgggtccccaagagcgagaaggacaagccggtgtgccggagacgctac
tatgaggagggctggctcgccacggggaatgggagaggagttgttggggtgacgtttaca
tctagtcactgcaggagggatagaagtacacctcagagaatcaattttaatctgcgtgga
cacaacagcgaggttgtcttggtgcgttggaatgaaccttttcagaagctcgccacatgt
gatatggaaggaggtatttttgtttggatccagtatgaaggaagatggtctgtggagtta
gtcaatgaccgaggtgcccaggtgagtgactttacttggtcacatgatggcactcaagcc
ctcatcgcatacagggacggctttgtgttggttggctcggtcagcggacaaagacactgg
tcctcagagattaacctggagagtcaaatcacctgtggcatctggacacctgatgatcag
caggtcttatttggtacagcagatggtcaagtgatcgtgatggattgtcatggccggatg
cttgcccatgttctgctacacgagtctgatgggattgtgagtatgtcctggaactgccct
gatttcctggtcgaggatagcacagagagtgacacagactctgatgacaatattctgcct
ttagtgcggagagtcaagcctttgttgacagtcaccttcttatcaggagacatcagttta
atgaacaactatgacgacctctctcctgccgtaattcgctcagggctgaaagatgttgag
gctcaatggtgctcccagggagacctcctggctgtggctggcatggagagacatgggcta
cctgtcgactctgcctgtgggcccatcatgaggaacgccctcgttaagttctataatgtc
caaggagagcatatctacactttggaaacaccggcacagaggcccatcaccaccatctgt
tggggtcatagagactctcgtttgttccttgcatgtggaccagcgctgtatgtggtgcgt
gtagagcacagggtggccagcctccaactcttatgccagcagggtatcgccagcgccctg
cgagaagagaaagatgtggggaaactgaacatgccctcgctgctctgctcttatgtgacc
actgctttcatacctaccatcaagcccccaattcctgaccccaacaacatccgtgacttt
gtcagctatcccacagctgggaatgagaggctccactgcaccatgaagcgagcggaggac
agccccgaggcaggcggtccctgctacactctctacctagaatatttaggaggactggta
cctattctcaaaggaagacgtatcagtaaactaaggcctgagtttgtcattatggatcca
aaaacagacagcaaagcagaggaggtgtgtgtgaatcccatgatctcgtacactgacagc
tgtaactgctccgactccagtgacattgagttgagcgacgaatgggttgggaagaagtca
ccgaagttatcccgaggaaacaggtcacctaaacttcaaagaatgaacatggattcaaga
aaatctccaaaactttcacgtgccaatcaggaaggccaacgatcaccacggttaccgaca
aagaagcctccaattcggtccccgagtctgacacgtcgagagttttctatggatggaatc
acagagcacaattacctcgctcaagtcacatccaacatctgggggacaaagttcaaaatt
gttggacttgcttctttcctccctgccaatcttggtgcagtcatttataagaccagtttg
cttcatttgcaaccgaggcagatgacaatttaccttccagaagtgcgaaagatttcacat
gacttcatgagcctgccggtgttcaatcccaatgtattcagtgaggatgaggatgactta
ccagtgatggggccctctggagtggcaggagacaatcctccctgtacagtcaacattcct
attgctcccatccacagcccagctcaggccatgtccccgactcagagtattggcctggtt
cagtctttattggccaatcagaatattcagcttgatgtcctcaccaaccctacagccact
gcagcagcagcagctgcagcagctgcagcttctgtccctgtttctgatcatggccaggat
gctgttgctacaccatacccagttccagctagatactcaaatcctggtcaggtgatcttc
aatgggctagagatgggtcctcttctgcctggtactttacctcccccacctccacctcac
caccatcatcagtcacagtcacagcagcagcaacaacaaatgcagcagcaacatcaacag
cttcagcaactgcatcaccaacagcagcaactccaacaacagcagcagcaacaccaacag
cagcagcagcagcaacatcaacaacagcagcaacatcaacaacaccaccagcagcagcag
caaatccggcaacagatccaggagatgaggcatcagcagcagcagctccagcagcagcat
cagcagatccaacagcaacaccaacagatgcagagacagcaccaacaaatgcagcagcaa
ctgaagatgcagatgtcgctgccccctcctcctactggctatccaaccatttccttacaa
cagattcatcttctgccccaaattctcccaggaaatcctcctcccaccactgagcctgga
ctggacaggggagaccatggacacatgctgaagccaagtctgcctcggactttacctccc
tccttcagtgatgcagatgggtctatggagattcagatgaggaaggtgaatcctccacct
ccataccctggcactgtagtgtctgcagcagcaaccacagctacagcggcagctacgcct
caaacacttgtcacaaactgtgacagccctagcatcctggcaccagacccctttttgaag
aaagatgagttcctgcttcacccagtgaccttacagtacccaacacctctggggtatgaa
aggatcacaacctttgacagcagtggcaacgtggaggaagtttgtcggccacgaaggcgg
ctcattcgcaaccaaaatgcgtacactgtccatggcatcgggggctcagccacactcaaa
gtcacttcatctgatagtaaaaaaattcagcttccatacagctcagcaacactgagtcgt
ctttctgtccctcgatactctatacctagtggggaccctcctccttaccctgatccagct
aatcaggtaaccactacacttcctcctccacagagaattgataacagtctgattcatgcc
actatacgccgtgaccgcagagatatgggactcaaagtgccacagatgatggatagctca
agaacccttcccactaaggctaagatgaacagtgcattagcactatcgtaccagcagagg
gtgcccactgcattgtacacatgcacacagtgcagcagtaacagcagcagcaccagcgtc
agtgtcagtggtggtggaacgacgagtagtggcattgcaggtggcacggtggtgaggcaa
gagttccccccagggaaaggagcacatcacagtactattattgtgcactccaaaagtgcc
tcacccctggcctcccagtcatcttacagtctgctgagtgctgttgataacagccgagac
agaacagtgtatgttaactctgcttttactgaagatgagactttgaatcagcagtgtcac
ctcgaaaaatcagtacgccagctgactctcggtgatgtcagtttgacagttaaacgccct
ccgccttaccaatgggacccctccaccacagaggagttctggctcacaccagagcaaacc
atattagctcccccaccaggacctcataaaccacctcctctcataattagtcaagcccag
cacttggacatgactcggctaccttttgtcctcaccactaaacctccatccagcccaagc
acaagcactcttactttcccatcaggttaccagatatctctctcgccttttcctccaggt
gtgggtcacagtggaccccaacttcagacgttacagaaccctccaccacagtgctctcca
aacgaagtggttggtccagtcccttttgctcagcaggaccccaatttggttctgccacca
ggttaccccccaaatcttgctaacctggcttgctgccctctccctccgatgtatccagga
gccagttcatgtgcaggacttcagctgcaccctgtaaacctgcacccctggaacccttac
ccctgcccacctcccatgcaagaccctccagcacctccccttcctactaagactcatcaa
attttagagaagccaattctctccccaccccctccaactggaccacctccgccaccgcct
ctgcctcctcctcctccacctaccgagctaccaccttccaaaagtgccacagaggatctt
gcagagtctgccaacaactttgcagagccatcatccttaaatgaaagccctgtgccacag
gagtcagatcgcttcaacaagaagagccgcaaaagactggacagcagagctgaggaggcc
aacttgcccactgtcgctgagggcaaatccagaaaggaaggccgtgcactctctgacttc
aacacgctcatttccagcccaaggcttggcagcagagagaagaagaagcccaaggggccg
agagagcagctcaacaaaaccaagaagatgagccgtacaacaaatgagttccaggatagt
tcagagagtgagccggagctgttcattagcggcgatgaactcatgaaccagaaccagagc
agcaagaagagctggaagaacaaacgcagcctgcgtatggcaagtgagctggaagaaata
aagtgccgcaaggcaaatgaaagagaggaccgtagtttaggcagccaagggtttgtctat
gttatggccaataaacagccattatggaatgaagccacccaggtctaccagcttgacttt
ggaggaagagtcacccaggagtcagcgaagaattttcagattgagctggatggtagacag
gtgatgcagtttgggcgaattgatgggaatgcctatattttggatttccagtatcctttt
tcagcagtgcaggcattcgctgtttccttggccaatgtgactcaaaggcttaagtga
DBGET
integrated database retrieval system
