Scomber scombrus (Atlantic mackerel): 134001072
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Entry
134001072 CDS
T10651
Name
(RefSeq) uncharacterized protein LOC134001072
KO
K08332
vacuolar protein 8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Membrane trafficking [BR:
ssco04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
134001072
Other autophagy associated proteins
Micronucleophagy
134001072
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134001072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT_2
HEAT
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
134001072
NCBI-ProteinID:
XP_062296605
LinkDB
All DBs
Position
19:7355628..7360213
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AA seq
566 aa
AA seq
DB search
MASGFCENCSRLLKDVAVHLRRVCREFGQKISDVFRELSQCTCIRNTPDRSFPRRKTTLH
LLHDHETQLLNQESLQTLSRLAASEKPDLQMTAAVYYLHLSHNLTSPLPDAFMEPILALL
FSSDLDVQKTISLSLVNLLVKNNVCKELAIEMGILIPILELFQSGDPTAQCHSCACVAML
ASSESNRDALMVDGIIPLLVLARSYDPPVQQSAAWALLHLTQSDWSMRILCQAGTIPVLV
LLLQSSDSEVQFYSCTALCNIAAIQEHHPKLLSIGGNYLLKSLVTLMSSSVQKNSAQACR
CLQNLSKNVLIQEQLMELDCVLPLKTLLKTSTPVWTKSALTLLSALSSHPPNNEALLNEG
VLDVMGHLLHHHCSSSVIITHSSKIITNLSSSCMGQQAVMETQCLSGLLGALVSPALSDE
TLMLVTSCLHNLMTWDPLKSKLSETVTSEQVSGLVKLSEQTGNLQLSYNCAVIISKLEMT
GEIIQLLRPQYITMSEYLLVFLKNKDVKFQHLGIVTIFNLKKDGDFSTLLANSELEVQLW
KVHAQTEETRRLLLMIQPISPSWLNP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggcttttgtgagaattgctcccgattgcttaaagatgtcgctgttcacttg
aggagagtctgtagagagtttgggcagaaaataagcgacgttttcagagagctttctcag
tgcacctgcataaggaatacacctgacaggagttttccgaggaggaagaccacattacac
ctcctgcatgatcatgaaactcaactgctcaatcaggagagtctgcaaacactgagcaga
cttgcagcctcagaaaagcctgatctacaaatgactgcagccgtgtattatttacatctc
agtcacaatctaacatcccccttaccagatgccttcatggaaccaatcttggctttactt
ttctcatctgacctggatgtgcaaaagactatctctctctccttggtcaatctgttagta
aagaataatgtatgtaaagagttggcgattgaaatgggaatactgatacccatactggag
ttgttccagtctggtgatcccaccgctcagtgtcactcctgtgcatgtgtggccatgctg
gcctcttcagagtcaaacagagatgctttgatggtggatggaatcattccactgttggtt
ttagcaagatcttacgatccgccggtgcaacagagcgcagcttgggccttgttacatctc
acacagtcagattggtcaatgaggatcttgtgtcaagcaggaacaattcctgtcctggtt
cttctgctgcagtcctcagattcagaggttcagttttacagctgcaccgctctgtgtaac
attgctgccatccaggagcatcacccaaagctcctcagcattgggggcaattatttgtta
aagtctcttgtgacactcatgtcttcatctgtgcagaagaattcagcccaagcatgcaga
tgcctacaaaatctatcgaagaatgttttgatccaggagcagctgatggagcttgactgt
gtgttgcctctgaaaacgctgctgaaaacttccactcctgtgtggacaaagtcagctcta
acactactgtctgcactgtcttcacatccacctaataatgaggccttattgaacgaggga
gtgctggatgtgatgggtcatctcctacatcatcactgttccagctctgttataatcaca
catagctccaagatcatcaccaacctgagtagctcctgcatgggtcagcaggctgtgatg
gagactcagtgcttatcaggactcctcggggcacttgtgtctccagccctgtcagatgag
actttgatgcttgtgacatcatgcttacataatctgatgacctgggatccacttaagtct
aagttgtcagaaacagtaacatcagaacaagtttcaggactggtgaagctctctgaacaa
acaggaaatcttcagttgtcatataactgtgcagtcatcataagcaaactagaaatgaca
ggggagatcattcagttgctgagacctcagtacatcactatgtccgagtacctgttggta
tttctcaaaaacaaagatgttaaatttcagcatcttggcatagttaccatattcaacctc
aagaaagatggagacttttcaacactgttggctaacagtgaactggaggtccagctttgg
aaggtgcatgcgcagacagaggagaccagacggctactgctaatgattcagcccatttct
ccatcttggctcaacccttaa
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