Scomber scombrus (Atlantic mackerel): 134001127
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Entry
134001127 CDS
T10651
Symbol
rptor
Name
(RefSeq) regulatory-associated protein of mTOR isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04136
Autophagy - other
ssco04140
Autophagy - animal
ssco04150
mTOR signaling pathway
ssco04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
134001127 (rptor)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134001127 (rptor)
04136 Autophagy - other
134001127 (rptor)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
134001127 (rptor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134001127 (rptor)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
134001127 (rptor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
Beta-prop_EML_2
HEAT
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
HEAT_2
WDR55
Beta-prop_WDR90_POC16_2nd
Cnd1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
EIF3I
WD40_2
PDS5
Motif
Other DBs
NCBI-GeneID:
134001127
NCBI-ProteinID:
XP_062296678
LinkDB
All DBs
Position
2:complement(5433190..5605846)
Genome browser
AA seq
1358 aa
AA seq
DB search
MKMDSDLLHSPAVGLAEEEEADMNDWKLPLAFMKKRHSEKIEGSKALAQSWRMKDRMKTV
SVALVLCLNVGVDPPDVVKTSPCARLECWIDPLSMSPQKALETIGANLQKQYENWQPRAR
YKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEIWVFNKNYTQYIPLS
IYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEVAAINPSHPLAQMPLPPSMK
NCIQLAACEASELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKSAKLVPGVTLDLIEKI
PGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMR
SYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQV
WLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLK
LLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADNYMPAEHRTMAVFI
LAVIVNSYNTGQEACLQGNLIANCLEQLSDPHPLLRQWVAICLGRIWQNFDPARWCGVRD
SAHEKLYTLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLINDGSPV
VRKELVVALSHLVVQYESNFCTVALQFIEEEKNYTVPSPANTAELGNLTPVRDSPAIPRL
RSVNSYTNIRTATTARNLNKSLQNLNLNEEGGPAAFSPGNLSTSSSASSTLGSPDNDEYI
LSFETIDKMRRVSSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPFPEVSDLAMKVLNSIA
YKATMNARPQRILDSGSLTQSAPASPTSKGTHIHQAGGSPPMPSTSSSSLTNEVPKPPAR
EQPATRPPYTPTLGGQAPHSHQFPRTRKMFDKGPEQAAEDGDEPGGHRNYISAALQTGLC
DWSAKYFAQPVMKIPEEHDLESQVRMERQWRFLRNARVRRHSRSITQKGVSRLDDQIFIN
RNPGVPSVVKFHPFNTCIAVADKDSICFWDWEKGERLDYFYNGNPRYTRITAMEYLNGHD
CSLLLTATDDGALRIWKNFADQKNPEMVTAWQGLSDMLPTTRGQPSTSAHSLARRVSIYL
DRSKQGGAGMVVDWEQETGLLMTSGDVRVIRIWDTDREMKVQDIPTGADSCVTSLSCDSQ
RSLIVAGLGDGSVRVFDRRMGPNECRVMTYREHGAWVVKAHLQKETDGHIISVSVNGDVR
FFEPRTPDSINVLQTVKGLTALDIHPQANLFACGSMNQFIAVYNANGDVISNIKYYDGFM
GQRIGAISCLAFHPHWPHLAVGSNDYYMSIYSAEKRLR
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggactcagacttgcttcactccccagcggtgggcctcgctgaggaggaggag
gccgacatgaacgactggaagctcccgctggccttcatgaagaagcggcactcggagaag
atcgagggctccaaggccttagcgcagagctggaggatgaaggacaggatgaagactgtg
agcgtagcgctggtgttgtgcctcaatgtgggagtggaccctcctgatgtagtcaagacg
tccccctgcgccagactggagtgctggatagatcctctgtcgatgagtccacagaaagcc
ctggagaccatcggggccaaccttcagaagcaatatgaaaactggcagcccagggctcgt
tacaaacagagcctggaccccacggtggacgaggtgaagaagctgtgcacgtcgctgaga
cgcaacgccaaagaggagcgagtcctcttccactacaacggccacggagtgccgcgaccc
accgttaatggagagatctgggtttttaataagaactacacccagtacatcccgctgtcc
atctacgacctgcagacgtggatggggagcccgtccattttcgtctacgactgctccaac
gcaggaatcatcgtcaagtccttcaaacagttcgccctgcagagagagcaggagctggag
gtggcagccatcaaccccagccatccgctggcccagatgcccctccctccctccatgaag
aactgcatccagctggctgcctgcgaggccagcgagctgctgcccatgaaccccgacctc
cctgctgacctcttcacctcctgcctcaccacacccatcaagatcgccctccggtggttt
tgtatgcagaagagtgccaagctggtgccaggggtgacgttagacctcatcgagaagatc
cctggcaggctcaacgacaggcgcactcccctcggagagctcaactggatcttcaccgcc
atcactgacaccatcgcctggaatgtgctgcccagagatttgttccagaagttgtttcgt
caggacctgctggtggccagcttgttccgcaatttcctgttagcggagaggataatgagg
tcatacaactgcacaccggtcagcagtccacgtctgccccctacatacatgcacgccatg
tggcaagcgtgggacctggctgtggacatctgcctctctcagttgcctaccatcatcgag
gagggcaccgccttcagacacagtcctttcttcgcagagcagctgacggcatttcaggtg
tggttgacgatgggtgtggagaacagaaaccctcctgagcagctccctattgtactgcag
gttctactgagtcaggtgcatcggctacgtgctcttgacctcctcggacggtttctggac
ctaggaccatgggccgtcagtctggccctctctgtagggatcttcccctacgtgttgaag
ctgcttcagagctcagccagagagctgcggccactgctggtttttatctgggccaaaatc
ctggctgtggacagttcgtgtcaagcagacttagtgaaagacaacggtcacaagtacttc
ctgtcagtgttggccgacaattatatgccagctgagcatcgaaccatggctgtcttcata
ttagctgtcattgtcaacagctacaacacaggacaggaggcctgtctgcagggcaaccta
atagccaactgcctggagcagctgtcagacccccaccctctgctccgccagtgggtggct
atctgcctgggccgcatctggcagaacttcgacccggcacgctggtgtggagtccgggac
agcgcccacgagaagctctacaccctcctgtcggatcccatccccgaggtgagatgtgct
gctgtcttcgctctcgggacgttcgtgggaaactccgccgagaggacggaccactccacc
accatcgaccacaacgttgccatgatgctcgcccagctcatcaacgacggcagccccgtt
gtccgcaaggagctggtggtagcactgagtcacctcgtggtccagtatgaaagcaacttc
tgcacagtagccctgcagtttatagaagaggagaagaactacacggtgccgtcgccagcc
aacactgcagagcttggtaacctgacaccagtgagggacagtccggccatcccacgcctg
cgatcggtcaactcctacaccaacatccgaactgccaccaccgcccgcaacctgaacaag
agcctgcagaacctcaacctcaacgaagagggtggaccggcagccttctctcctggtaac
ttgagcaccagcagcagcgccagcagcaccctggggagccccgacaacgacgagtacatc
ctgtccttcgaaaccatcgacaaaatgagacgggtgtcttcgtattcctccctcaactcc
ctcataggcgtgtccttcaacagtgtttacactcagatctggagagtgctgctacatctc
gccgcagaccctttccccgaagtgtctgatctggccatgaaggtccttaacagcatcgcc
tacaaggcgaccatgaacgctcggcctcagaggatcctggactctggatctctcacccag
tcagccccggccagccccaccagcaagggcacgcacatccaccaggccggtggttctcct
cccatgcccagcaccagcagctctagcctgaccaacgaggtgcccaaaccccccgccaga
gagcagccggccacacgccccccttacacacccacactgggaggacaggcgccccactcc
caccaattcccccgcacccgaaagatgtttgacaagggacccgagcaggcagctgaggat
ggggacgagccaggtggtcacaggaactacatcagcgcagccctccagacgggtctgtgt
gattggagcgccaagtattttgctcagccagtcatgaagatcccagaggagcatgacctg
gagagtcaggtgaggatggagcggcagtggaggttcctgagaaacgctcgtgtgagaagg
cacagccggagcatcacacaaaaaggtgtttcccgtctggacgatcaaatattcatcaac
cgcaaccctggcgtgccgtccgtcgtgaagttccaccccttcaacacctgcatcgctgtg
gccgacaaggacagcatctgtttttgggactgggaaaaaggcgagaggctggactacttc
tacaacgggaaccctcgctacacccgcatcacggccatggagtacctgaacggacacgac
tgttcattactgctcaccgcaacagatgatggagcgctgcgtatctggaagaacttcgcc
gaccagaagaatccagagatggtgacggcatggcagggcctttctgacatgctgcccact
accagaggtcagccctccaccagcgctcacagtctggccagaagggtctccatctatctt
gacaggagtaagcaaggaggtgcagggatggttgtggactgggagcaggagaccggtctc
ctcatgacgtctggagatgttcgagtcatcaggatctgggacactgacagagagatgaaa
gtccaggacatcccgacaggagcagacagctgtgtgaccagcctgtcatgtgactcccag
cgctcgctcatcgtcgccggtctgggtgacggctctgtacgggtcttcgataggagaatg
ggtcccaatgaatgtcgggtgatgacctacagagagcacggagcctgggtagtgaaagct
catctacagaaggagacagatggacatattatcagtgtcagcgttaacggagacgttcga
ttctttgaaccgcggacaccggactccattaacgtgctgcagacggtgaaggggttaaca
gccctggacatccacccgcaggctaacctgttcgcctgtggatcgatgaaccagttcata
gcggtctacaacgctaacggcgatgtgatcagcaacataaagtactacgatggcttcatg
ggacaaaggatcggggccatcagctgtttagctttccatcctcactggccccacctggca
gtaggcagcaacgactactacatgtccatctattcagcagagaagaggctcagataa
DBGET
integrated database retrieval system
