Scomber scombrus (Atlantic mackerel): 134001170
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Entry
134001170 CDS
T10651
Symbol
nkx2.2a
Name
(RefSeq) homeobox protein Nkx-2.2a isoform X1
KO
K08029
homeobox protein Nkx-2.2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134001170 (nkx2.2a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
134001170 (nkx2.2a)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134001170
NCBI-ProteinID:
XP_062296722
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Position
19:18838235..18839774
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AA seq
281 aa
AA seq
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MSLTNTKTGFSVKDILDLPDTNDEEGSITGAEEDTEGSETTSTTKTTGVLVKSPLENVQN
LPLKNPFYDSSDNPYTRWLATTDSIQYSLFLPFLAAVHGLSASTQESAKSPEPSADDESP
DNDKETSSSGGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQ
VKIWFQNHRYKMKRARAEKGMEVTHLPSPRRVAVPVLVRDGKPCHTLKAQDLAATFQAGI
PFSAYSAQSLQHMQYNAQYSAAATPQFPTAHHLVQTQQWTW
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaccaacacaaagacgggcttctctgtaaaggacattttggaccttcctgac
acaaatgacgaagaaggatctatcaccggagcggaggaagacacagagggatcggagaca
acatccacgacaaaaaccactggagttttggtgaaaagtcctctagaaaacgttcaaaat
ctgcctttaaagaaccctttttatgacagtagtgacaatccttacacacgatggcttgct
actacggacagtattcaatattcattgtttctcccgtttcttgccgcagtgcacggtcta
tcagccagcactcaggagtcggccaagtccccggagccgtccgcggacgacgaatcgccg
gacaacgacaaggaaacttccagcagcggaggcagcgactccggaaagaaacggaaaagg
agggtgttgttttccaaggctcagacctacgagctggagcgccgcttcaggcagcagagg
tacctgtccgcaccggagagggagcacctggccagtctgatccgtctcaccccgacccaa
gtgaagatctggttccagaaccaccggtataagatgaagagagcccgggccgagaaaggt
atggaagtgacccatctcccttctcccaggcgggtggccgtgcccgtcttagtcagggat
ggaaagccttgtcacactcttaaagctcaggacttggcggccacttttcaggccgggatc
cccttctcggcttatagtgcccagtcactccaacacatgcagtataacgcgcagtacagc
gccgcggccacgccacagttccccacagcacatcacttggtgcaaacgcaacagtggact
tggtga
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