Scomber scombrus (Atlantic mackerel): 134001234
Help
Entry
134001234 CDS
T10651
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssco03021
]
134001234
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
134001234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
PUF_NOP9
BRF2-like_C_cyclin_rpt
RRN3
Zn_ribbon_tTFIIB
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
134001234
NCBI-ProteinID:
XP_062296786
LinkDB
All DBs
Position
19:1671298..1825232
Genome browser
AA seq
579 aa
AA seq
DB search
MSPKVCKNCGGSDIDVDQARGDAVCMTCGSVLEDNIIVSEVEFVETGGGGSSAVGQFVAA
GGGNRNPSFGDGHFTGVGRESRAQTLQKAKQNINTLGRQLQMNQHCLDTAFNFYRMALGK
QLTRGRKASHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGRTFLVLARELCINAPA
IDPCLYIPRFAQLLEFGEKNHDVSMTAMRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
DFRRTIKEIVGVVKVCESTLRKRLTEFEDTPTSQLTIEEFMKTDLDQECDPPCFTAGLKK
KKAHQLEIELKKKMDDVEDEIQSYQDEIDTELQNSRPKLRGVYAAYAKEEVGDDIDDIIS
TSSKLEDGEEAAAEEEEEDEEEDVIQAVAKHFGKELGDLTLEALIKLEQKTPEEEEEEEE
GEEGGIPKRKGPTLANILGRMPTAATLGLNESISKCMGEEKENGSCMQMEVLRSQAGSGL
VQASVNYGGYGRLQPFITGQANKKLAVEQPATANTTATTNPLPVPVGAPASSVLVESGPV
VYDDVAVEEEEEEEDEACVSAMELMGAQDYGSDDYDEGF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccaaagtatgcaagaactgcggcggctcggacatcgatgtggaccaggcgagg
ggcgacgccgtctgcatgacgtgcggctccgtgctggaggacaacatcatcgtgtccgag
gtggagttcgtggagacgggaggaggaggatcatcggccgtcggacagtttgtcgctgca
ggaggtggaaacaggaatccctcttttggagacggacacttcacaggtgtggggagagag
tcccgagctcagacgctgcagaaagcgaagcagaacatcaacactctgggtcgccagctg
cagatgaaccagcactgtctggacaccgccttcaacttctaccggatggcgctcggcaaa
cagctgacccgcggccgcaaagcctcgcacgtcatcgccgcctgcctctacctggtctgc
cgcaccgaggggacgccacacatgctgctggatctcagtgatctcctgcaggtcaacgtt
tacatcttggggagaactttcctcgtcttggccagagagctgtgcatcaacgcgccggct
atagatccatgcctctatattcctcgtttcgcccagctgcttgagttcggggagaagaac
cacgacgtttccatgacggcgatgaggctggtgcagaggatgaagagggactggatgcac
acgggacgacggccgtccggactctgcggagcagctctcctcgttgcagcacgcatgcac
gattttcgccgcaccatcaaagaaatcgttggtgtcgtaaaagtgtgtgaaagcacgctg
agaaaaagacttacagagttcgaggacactcccaccagtcagctgaccatcgaagagttc
atgaagacggatctggaccaggagtgtgaccctccctgctttaccgccggactcaagaag
aaaaaagcccatcagctggagatcgagctgaagaaaaagatggatgacgttgaagatgaa
attcagagctaccaggatgagatagacacagagctgcagaacagcagacccaaactgaga
ggagtttacgccgcctacgccaaagaagaagttggagacgacatcgacgacatcatctcc
acgtcgtctaagctggaagacggcgaggaagcagcagcagaagaagaggaggaagatgaa
gaagaagacgtgattcaggccgtggccaaacactttggcaaagagctcggcgatctcacg
ctggaggctctgataaaactcgagcagaagacgccagaggaggaagaggaggaggaggaa
ggagaggaggggggcatcccgaagagaaaaggcccaacgctggccaacatcctgggcagg
atgccgaccgccgccactctgggtctcaacgagtccatcagcaaatgcatgggagaggag
aaggagaacgggagctgcatgcagatggaggttctgcggagtcaggctggttctggtttg
gttcaggcttcagttaattatggtggatatgggaggttgcagccgttcatcaccggacag
gccaacaagaagctggctgtcgagcagcctgccactgccaacaccaccgccaccactaac
cccctgccggtgcccgtcggagcccccgccagcagcgtgttggtcgagagcggcccggtc
gtgtacgatgacgtcgccgtggaagaggaagaggaggaggaggacgaggcttgtgtcagt
gccatggagctgatgggagctcaagattacggctccgatgattacgatgaaggattctag
DBGET
integrated database retrieval system
