Scomber scombrus (Atlantic mackerel): 134001313
Help
Entry
134001313 CDS
T10651
Symbol
si:ch211-286b5.4
Name
(RefSeq) LOW QUALITY PROTEIN: afadin- and alpha-actinin-binding protein B
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04517
IgSF CAM signaling
ssco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134001313 (si:ch211-286b5.4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134001313 (si:ch211-286b5.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
134001313 (si:ch211-286b5.4)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
134001313 (si:ch211-286b5.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4402
Motif
Other DBs
NCBI-GeneID:
134001313
NCBI-ProteinID:
XP_062296865
LinkDB
All DBs
Position
2:10310338..10313644
Genome browser
AA seq
457 aa
AA seq
DB search
MASRFGERKVGKHQDYSEYFLHRDPSPNPLTELSHSASWWADREEHKPQGHSLRKQIKES
DEHVARLQDLLRCERTKCTRLQLRCNQQDAELKRREQLSNRLKERLSQQIDRHREKGPSI
EVLNLPPGARGKREQPVKSFRPSAKREEATLRVMLERREAELREAMKLRYNLTTLLHALR
VDMERVRKEXRAFSCAYSVDVEDEAQNEDMRLDEAEVALGDHVTGGVVQGWKLVQRRLCE
VLSEGHTGGGTDHDKLLAQLETELKASQQLVKLQQQLLQDSLMSPVPSELADSYFLEEWE
RLQVRWAELDHQRRTFERERQTFTDAAIRLSHERHDFEQQKAFLLKQQYLCDSPQFGQEA
QSSNRESIALNVSGLVHNSISGCVPITPSSTKSGATSVSGLHQGRIRVQTPSTPELYSAL
NLSYNCRARDDHQSETWYGRADRMVHRTQSPDLDWSF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaggtttggtgagagaaaggttggaaaacaccaggactactcagaatacttt
ctgcatagggaccccagccccaaccctctgactgagctctctcacagtgcctcctggtgg
gctgacagggaggagcacaaaccccaaggacactcgctcaggaagcagataaaagaaagc
gatgaacatgtggcccggcttcaggacctgctgcgatgtgagcggaccaaatgcacccgc
ctgcagctgcggtgtaaccagcaagatgcagagctgaagcgtcgagagcagctcagcaac
agattgaaggagcgactgtcacagcagattgacagacaccgagagaagggaccctccatc
gaggtgctgaaccttccacctggagctcgaggaaaaagagaacagccagtcaaatctttc
aggcccagtgcaaagcgagaggaggcaacactacgtgtgatgttggagcgcagagaagca
gagctcagagaggcgatgaagctgcgctacaacctcaccactttacttcatgcactcaga
gtcgacatggagcgggtgaggaaagaatgaagagccttttcctgtgcctactctgtggat
gttgaggatgaggcccaaaatgaagacatgaggctggatgaagccgaggtggcgcttggt
gaccatgtgacgggaggtgtggttcagggttggaaactggtgcagaggagactgtgcgag
gtcttatctgaaggccacactggtggtggtacggaccatgacaagctcctggctcaacta
gaaaccgaactgaaggcgagtcaacaacttgtcaaactacaacaacaactgctgcaggat
agtctcatgtcacctgtcccctctgagctggctgactcctattttttggaagagtgggag
cgccttcaggtgcgctgggcagagctcgatcatcagaggcgaacttttgaaagggagagg
cagaccttcactgatgctgcaatacgattgagccatgagcgtcatgattttgagcaacag
aaggcttttctcctgaagcagcagtatttatgtgactcgcctcagtttggtcaagaagca
caaagcagcaacagagagagcattgccctcaatgtctcaggtttggtgcacaacagcatc
tctggctgtgttcctattacgccatcgtccaccaagtcgggggccacttctgtttcagga
ttacatcagggaagaatcagagttcaaacccccagcactcctgagctctactctgccctc
aacctgtcatacaactgtcgagccagagatgatcaccagtcggagacatggtatggcagg
gcagacaggatggtgcaccgaactcagtctccagacttggactggtcattttga
DBGET
integrated database retrieval system
