Scomber scombrus (Atlantic mackerel): 134001361
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Entry
134001361 CDS
T10651
Symbol
nrxn3a
Name
(RefSeq) neurexin 3a isoform X1
KO
K07377
neurexin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134001361 (nrxn3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134001361 (nrxn3a)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
134001361 (nrxn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
134001361
NCBI-ProteinID:
XP_062296919
LinkDB
All DBs
Position
19:28140954..28381639
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AA seq
1681 aa
AA seq
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MDLVSFSVRLQVFLSTCMGLEFLGTPGQWARYHRWDASTRGDLSFQLKTDASEALLLYFD
DGGYCDFLQLSVVEGRLQLRFSIDCAEATVVSERRVDDSSWHFATLSRYNLRTVLGLDGQ
AKADEVRPQRQFMKIVSDLFLGAVPQDIHNSALTLPTVQNMQPFKGTITDLKYGNSQPLF
LGSLKVPLESEGWCTVNPCENGGTCSVVDGEPVCDCSKTEYKGRFCNEEEEPQPGPSENA
LVSQEGDLVFNPGGDRGRVGCGSVHHPTRAREENVATFRGSEYFCYDLSQNPIQSSSDEI
TLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSWH
DVKVTRNLRQQSGIGYAMVNTLHCMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPS
TADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLARIVDPKMKIQGEVSYKCENVATLDP
ISFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDAARSQKNTKVDF
FAVELLDGSLYLLLDMGSGTIKVKATQTKVNDGAWYHVDIQRDGRSGTISVNSRRTPFTA
SGESEILDLEGDMYLGGLPTDRTNLILPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIA
EAQNGAGIKPSCNKQPGKQCESYPCKNRGVCKEGWNRFICDCTGTGFWSRTCEREASILS
YDGSMYMKVVMPTIMHTEAEDVSLRFRSQRAYGLLMATTSRDSADTLRLELDGGRVKLTV
NLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKTYKLTVDDDVAEGQMVGDHTR
LEFHNIETGIMTDRRFVSSIPSSFIGHLQSLRFNGMLYIDLCKNGDIDYCELNARFGIRS
IIADPVTFKSKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGY
IHYVFDLGNGPNLIKGKSERALNDNQWHNVAITRDNSNTHTLKVDATATSQSINGAKNLD
LKGDLFIAGLGPGMYGNLPKLVASREGFQGCLASVDLNGRLPDLLSDALFRSGQIERGCE
GPSTTCQEDSCANMGICIQQWENYTCDCSMTSYTGTQCNDPGTTYIFGKGGGLITFKWPA
NERPSTRTDRLTVGFSTSLKDGILVRIDSAPGLGDYLMLHIQQGKIGVTFNIGTVDISVQ
ESSIPVNDGKYHVVRFTRNGGNATLQVDNWSINEHFPTGNSDIERYQMANKKIPFKYARP
VEEWLQEKGRQLTIFNTQATVAIGGSDRGRPFQGQLSGLYYNGLKVLNMAVEGNPNIKIN
GSVRLVGDVPSVAGSARTTAMPPEMFSTFIETTTMMSTTTTRKHRSSSTVQHTADEIVSS
AECSSDDEDLEECETSHAAELVIPVLEDPLAHPPVAPRAPFIPTPSTHHPLLTIIETTKE
SLSKTTEAGVPCLSDRGSDDCDDDGLVKSGYGSGEAFKSNLPPTDDEDFYTTLSLVTDKT
LTITTAIPLTADQSRTTATSAFTATLHNAPAKQLAGKMNNRELKPQPNLVLLPLPTSFEV
DSTKLRGPLITSPVFHNIPTALPTEPGVRRVPGPSEVVRESSSTTGMVIGIVAAAALCIL
ILLYAMYKYRNRDEGSYQVDESRNYITNSAVQSNGTVLKDKQQSLKGSNKKQKNKDKEYY
V
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgtaagtttttctgtcaggctgcaggtgttccttagcacatgtatgggactg
gaatttttaggcacaccaggtcagtgggcacgctaccaccgatgggatgccagcacccgc
ggtgatctcagcttccagctcaagacagatgcttcagaggcgctgctgctgtactttgat
gatggaggttactgtgactttctgcagctgtcggtggtggagggccgactccagctgcgt
ttcagcatcgactgtgctgaggccacagttgtgtctgaaagacgagtggatgatagcagc
tggcactttgctacactgagcaggtataacctgcgcacagtgctgggactggacggccag
gccaaagcagatgaggtgcggcctcagcgtcagttcatgaaaatagtcagcgatctcttc
ctgggtgcagtgcctcaggacatccacaacagtgcgctgactcttcccacagtgcaaaac
atgcagcctttcaagggcacaattacagacctcaaatatggcaactcgcaacccctgttc
ctgggaagccttaaggtgccgctggagtcagaagggtggtgcaccgtgaacccgtgtgag
aatggcggtacatgctcagtggtggatggagagcctgtctgtgactgctccaaaacagaa
tacaagggacgcttctgcaatgaagaggaggagccacagccagggccctcagaaaatgca
ctggtgagtcaggagggagatcttgtattcaatcctggcggagacaggggaagagttgga
tgtggatctgttcatcatccaaccagggcaagggaagagaatgtggccactttccgtggc
tcagagtacttctgctacgacctctcccagaaccccatccagagcagcagcgacgagatc
acactatccttcaagacatggcagcgcaatggtctaatccttcatactggcaagtcagca
gactacgtcaacctggcactgaaggatggcgccgtctcccttgtgattaacctaggctct
ggagcctttgaagccattgttgagccagtcaacgggaagttcaatgacaactcgtggcat
gatgtcaaagtgacccgcaacctccggcagcaatcaggcattggatacgctatggtaaac
acactccattgtatggtgacaatatcagttgatgggattctgaccaccacgggttacacc
caagaagactacactatgttgggatctgatgacttcttctacgtgggtggaagccccagc
actgctgacctgcctggatctccagttagcaacaacttcatgggctgtctcaaggaggtg
gtgtataagaacaatgacatccgtcttgagttatcccgtctggctcgaattgtggaccct
aagatgaaaattcaaggcgaggtgtcctacaagtgtgagaatgtggccaccctggaccca
atttcttttgagactccagaggcctatattagtttgccaaagtggaacaccaagcggatg
ggatccatttctttcgattttcgcactactgagcccaatggcctcatcctcttcacccat
ggcaaaccacaggagcgcaaagatgctgcgcgtagccagaagaacaccaaggttgatttc
tttgcagtagagctgctagatggcagtctgtacctgctgttggacatgggctcaggaact
atcaaggtaaaggccacccagacaaaagtaaatgatggtgcctggtatcatgtggacatc
cagagagatggacgctcaggcaccatctctgtgaacagcagaaggactccattcacagcc
agtggtgagagcgagatcctggacctggaaggtgacatgtacttgggggggcttcccact
gatcgtactaacctcattctgcccactgagctctggacagcgatgctcaattatggctat
gtgggctgtatccgtgaccttttcattgatggtcgaagcaaggacatccgtcagatagct
gaggcacaaaatggagctggcatcaaaccctcgtgtaacaagcaacctggcaagcagtgt
gagagctacccatgcaagaaccgaggtgtctgcaaagaaggttggaatcgattcatctgc
gactgcaccggcactggcttctggtcacgcacctgtgagagagaggcttctatcctttcc
tatgatggcagcatgtatatgaaggtggtcatgccaaccatcatgcacactgaggctgag
gatgtctctctgcgttttcgctcccagagagcttatggcctcctcatggccactacctcc
cgagactcagccgacactctcaggctggagttggatgggggtcgtgttaaactcacggtc
aacctagactgtatcaggataaactgtaactccagcaagggaccggagacgctgtatgct
gggcaaaagctcaatgataatgaatggcatacagtgcgtgtggtgcgtcgtggcaaaacc
tacaagctaacagttgacgatgatgtagcagaaggccaaatggtgggtgaccacactcgt
ctggagttccacaacatcgaaacgggcatcatgacagaccgccgatttgtttccagcatc
ccatccagtttcattggtcatctgcagagcctcagattcaacggcatgctctacattgac
ctgtgcaagaatggtgacattgattattgcgagctcaatgcccgctttgggattcgttct
attattgccgacccggtcaccttcaaatccaagagcagctatctgagcctggcaacctta
caggcctacacatccatgcacctcttcttccaattcaagaccacctccccagatggcttc
atacttttcaactctggagatggaaatgattttattgctgtagaactggttaaaggatac
atccactatgtttttgaccttggaaacgggcctaacctcatcaagggcaaaagtgaaagg
gcactaaatgacaaccagtggcataatgtggccatcacgcgagacaacagcaacacccat
acactgaaagtagacgctacagccactagtcagagtatcaatggggccaagaatctggac
ctgaaaggcgatctgttcatcgcaggactgggtccaggcatgtatggcaacctgcctaaa
ttggtggcttccagagagggcttccagggctgtttggcatcagtggatctcaatggtcgc
ctaccagatctcctcagtgacgccttgtttcgcagtgggcagattgaacgtggatgcgaa
ggtcccagtactacctgtcaggaggactcctgtgccaacatgggtatttgtattcagcaa
tgggagaactacacctgtgactgctccatgacctcctacactggcacacagtgcaatgac
cccggaacgacgtacatctttggtaaaggagggggcctcattactttcaagtggccagcc
aatgagagaccgagcaccaggacagacaggctgaccgttggcttcagcacctctctcaaa
gatggcattcttgtcaggattgacagtgctcctggtttgggggactatcttatgctgcac
atacaacaaggcaaaattggagtgacattcaacattggcactgtggatatcagtgtgcag
gagagcagtatcccagtgaatgatgggaaatatcatgtggtccgcttcaccagaaatggt
ggtaatgctacgctgcaggtggataactggtccatcaatgaacacttccctacagggaac
agtgacattgaacgctatcaaatggccaataagaaaattcctttcaaatacgccagaccc
gtagaagagtggctacaagaaaaaggacggcagctaacaattttcaacactcaagcaact
gttgcaattggtggtagtgatcgaggccggccatttcaaggtcaactgtctggtctttat
tacaatggcctcaaggtgttgaacatggccgttgagggcaaccctaacatcaagattaac
ggcagtgtcaggttggtaggtgatgtgcccagtgtggcaggctcagccaggaccacagcc
atgcctccagagatgttctctactttcatcgagactactaccatgatgtccactaccacc
acacggaaacacagatcctcctcaactgtacagcatacggcagatgagattgtttcatct
gcagagtgttcgagtgatgacgaagacctggaggagtgtgaaactagtcatgcagctgaa
ttagtcatcccagtacttgaggatccattagcgcacccccctgtagctcctcgtgcaccc
ttcattcccactccctcaacccaccacccactcctcaccattattgagaccaccaaagag
tccctgtccaagaccactgaggcgggggtaccttgcttgtcggaccgaggcagcgatgat
tgtgatgatgatggcttggtgaaatcggggtatggctctggggaagcgttcaagtctaac
ctaccccctaccgatgatgaagatttttacacgaccctctccttggtaacagataagacc
ttgactatcactaccgccataccactaaccgccgaccagagccgcaccaccgccacctct
gccttcaccgccaccctccacaatgctcccgccaaacagctggctggcaaaatgaataac
cgcgagctaaaaccccagcccaacctagtgttgcttccattgcccacatcctttgaggta
gacagcaccaaactgaggggcccattaataacctcccccgtgttccataatatacccaca
gcacttcccacagaaccaggcgtcaggagagttccagggccctcggaagtggttcgtgaa
tctagcagcaccaccgggatggtcatcggaatagtggcggccgctgccctgtgcatcctc
atccttctttatgccatgtataagtacaggaacagggatgaagggtcctaccaggtggac
gagagcaggaactacatcaccaattcagctgtgcagagtaatggcactgtcctgaaggac
aagcagcagagcttaaaaggcagcaacaaaaaacagaaaaataaggataaggagtattat
gtgtga
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