Scomber scombrus (Atlantic mackerel): 134001368
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Entry
134001368 CDS
T10651
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04082
Neuroactive ligand signaling
ssco04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134001368 (gabrb1)
04082 Neuroactive ligand signaling
134001368 (gabrb1)
04519 Cadherin signaling
134001368 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
134001368 (gabrb1)
Ion channels [BR:
ssco04040
]
Ligand-gated channels
GABA-A
134001368 (gabrb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
134001368
NCBI-ProteinID:
XP_062296934
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All DBs
Position
19:27501997..27576116
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AA seq
477 aa
AA seq
DB search
MSTTLDRGCWGVCCLSLLVTVVCGAQSANEPSNMSYVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWQGGSNAGSVTGVENIELPQFDIIDYQTLSKKAVFATGSYPRLSLSFK
LKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNENKSRLE
SNKVQVDAHGNILLTNLTSEMGGDMMGALNDPRATMFSYDSASIQYRKPMTSRDLYGRPA
IDRPMGHKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPIAFTFFNLVYWLYYVH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactactctggaccgcgggtgctggggggtctgctgcttgtccctgctggtgact
gtagtctgcggggcgcaaagtgccaacgagcctagcaacatgtcatacgtgaaagccacc
gtggacaagctgctgaagggctatgacatccgtctgcggcctgattttggaggcgcccct
gtggatgttggcatgagcatagacatcgccagtattgacatggtgtctgaagtcaacatg
gactacaccatcaccatgtacttccagcagtcctggagggacaagcgcctctcctacact
ggcatccctctcaacctcactctggacaaccgggtggcagaccagctgtgggttcctgat
acctacttcattaatgataagaagtcctttgtccacggggtgacagtgaaaaaccgaatg
atcagactgcaccctgatggaaccgtgctttatggtctcaggattaccactacagctgcc
tgcatgatggacttgcgcagatacccgctggatgagcagaactgcaccctggagattgag
agctatggatacaccactgatgacatcgagttctactggcagggaggaagtaatgcagga
tcagtcactggggtggagaacattgaactgccccagttcgacatcatagactaccaaaca
ctctccaagaaggctgtgtttgccacaggctcttatccacgactgtccctgagtttcaag
ctgaagagaaacattggttatttcatccttcaaacctacatgccctccaccctgatcacc
atcctatcgtgggtctccttctggattaactatgatgcctcggctgccagagtggcttta
ggtataactactgtgctgactatgaccaccatcaatacccacctcagggagactctgccc
aagattccgtatgtcaaggccattgacatttacctgatgggttgctttgtctttgtcttc
ctggctttactggagtacgcttttgtcaactacatcttctttggtcgaggtcctcatctg
caaaaaaaggtggcagaaaaggctgcaaaatccaacaacgagaataagagcagactggag
agcaacaaagtgcaggttgatgctcatggcaacatcctcctaaccaacttaaccagtgag
atgggtggagacatgatgggcgctctcaatgaccctcgggctacaatgttctcttatgat
agcgccagcatacagtaccgcaaacccatgaccagccgagacctgtacggacgaccggcc
atcgaccggccaatgggccacaagaagagtcgcttgaggaggagggcctcgcagctcaaa
gtcaagatccctgacctcacggatgtcaatgccatagacaagtggtcccgtgtcatcttc
cctatcgcattcaccttcttcaacctggtctactggctttactacgtccactag
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