Scomber scombrus (Atlantic mackerel): 134001734
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Entry
134001734 CDS
T10651
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137
Mitophagy - animal
ssco04141
Protein processing in endoplasmic reticulum
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
134001734 (zgc:136908)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
134001734 (zgc:136908)
Membrane trafficking [BR:
ssco04131
]
SNARE
SNARE associated proteins
Others
134001734 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
134001734 (zgc:136908)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134001734 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134001734
NCBI-ProteinID:
XP_062297060
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Position
2:11110865..11119420
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AA seq
837 aa
AA seq
DB search
MQQSKEKKLRLCLELLGCKKTKTTLGQIRSVRTSNLCPKGEDFSTAILKQKHRPNRLIVD
EAINEDSSIVSLSQNKTEELQLFRGDTVVLRGRKRRQTVCIVLTDATCGDERIRMNRVTR
NNLRVRLGDVISIHACPDIKYGKRIHILPIDDTIEGLTGNLFEVFLKPYFLEAYRPVHQG
DVFLVRGSMRAVEFKVVETDPSPYCIVAPDTVMYCEGEPIKREDEEESLNDIGYDDIGGC
RKQLAQIKEMVELPLRHPGLFKTIGVKPPRGILLYGPAGTGKTLVARAVANETGAFFFLI
NGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLL
TLMDGLKQRAHVVVMAATNRPNSVDTALRRFGRFDREIDIGIPDSTGRLEILQIHTKNMK
LADDVDLERIGTETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDTIDADLLNSLAVTM
DDFEWALSQSNPSALRETVAEVPHVNWEDIGGLDDVKRELQELVQYPVEYPDKFLKFGMT
PSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPEMLTMWFGESEANVRDVFDKARQA
APCILFFDELDSIAKSRGGGGGDAGGAADRVINQILTEMDGMSDKKNVFIIGATNRPDII
DAAILRPGRLDQLIYIPLPDKRSRSAILRANLRKSPIARDVDLEYLSGITEGFSGADLTE
ICQRACKLAIREAIEAEIKAERQRQSRPGIPMDEDFDPVPEIRKDHFEEAMRFARRSVSD
NDIRKYEMFAQTLQQSRGFGNFRFPSATSSQSGSQGSGSGSGRPGLYREEGEDDLYQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagagtaaagagaaaaaactgagactctgcttggaacttctgggctgcaagaag
accaaaaccacactggggcagatcagatcagtcagaacctcaaacctttgcccaaaggga
gaagatttctcgactgccatcctgaagcagaaacacagaccaaacagactcattgtggac
gaagctatcaatgaagacagcagcattgtcagcctatcacagaacaagacagaggagctg
cagctcttccggggggacacagtggtgttgaggggtcggaagcgccgccagacagtgtgc
atcgtcctgactgatgccacctgcggagatgaacggatccgcatgaaccgtgtgacccgc
aataacctgcgtgtccgccttggtgacgtcatcagtattcatgcctgccctgatatcaag
tatggaaagaggatccatatcctccccatagatgacaccattgagggcctgacagggaac
ctctttgaggttttcctcaagccatactttctggaggcttaccgccccgtacatcaaggg
gacgtcttcctggtgagggggagcatgcgggctgtggagttcaaggtggtggagacagac
ccgagcccttactgtatcgttgcccctgacaccgtcatgtactgtgagggagagccaatc
aaaagagaggatgaggaggagagtcttaatgacattggctatgacgacatcggaggttgt
cgaaagcagcttgcccagattaaagagatggtggagcttcctctcagacaccccggcctt
tttaagacgataggagttaagccccccagaggtatcctgctgtacggccctgcaggcaca
gggaagaccctggttgcgcgagccgtagccaatgaaaccggcgccttcttcttcctcatc
aatggtcctgagatcatgagtaagctggctggagagtcagagagcaacctgagaaaggcc
tttgaggaagcagagaaaaacgctccagccatcatctttattgatgagctggatgccatc
gcccccaagagagagaagacccatggagaagtggagaggcgtatagtgtcccagctcctg
accctgatggatggcctgaagcaaagagctcatgtggttgtcatggcagcaacaaaccga
cctaatagtgtggatactgctctgagacgctttggcagatttgaccgtgagatcgacatt
ggaatcccagattcaactggcagactggagatcctgcagatccacaccaaaaacatgaaa
ctggctgatgatgtcgatttggagaggatcggcacagagactcacggccatgtgggcgcc
gacctggctgctctgtgctcagaagctgctctgcaagccatccgcaagaagatgacactc
atagacctggaggacgataccatcgatgccgacctgctcaactcactagctgtcaccatg
gacgacttcgagtgggctctgagtcagagcaacccatcagctttgagagaaactgttgca
gaggtacctcatgtcaactgggaagacatcggaggactggacgatgtcaagagagaactt
caagaactggttcagtacccagttgagtatccggacaagttcctaaagtttgggatgacc
ccatctcggggagtgttgttctatggtcccccaggctgtgggaaaacccttctggctaag
gccattgccaatgagtgccaggctaactttgtctccatcaaaggacctgagatgctcacc
atgtggtttggagaatcagaggccaatgtcagagacgtctttgataaggccaggcaagca
gccccctgcatcttgtttttcgacgagttggactccattgccaaatccagagggggcggt
ggcggggatgcaggtggcgcagctgacagagtcatcaaccagatactcacagagatggat
ggcatgtccgacaaaaagaatgttttcatcataggcgccacgaacagaccagacatcata
gacgcagccatcctgaggccgggccgtttagatcagctcatctacatcccgctcccagac
aaacgctctcgcagcgccatcctacgcgccaacctccgcaagtcccctattgcccgagac
gtggaccttgaatacctgtctggtatcactgagggtttctctggagccgacctgacagag
atctgccagcgggcttgtaagctggccatccgtgaggccatcgaggccgagatcaaagct
gaacgtcagaggcagagcagaccgggcatccccatggatgaggacttcgatccagtccca
gagatcaggaaggaccactttgaagaggcaatgcgatttgctcgtcgctctgttagtgac
aatgacatccgtaaatatgagatgtttgctcaaactctgcaacagagccgaggttttggg
aacttcaggttcccctcagctactagttcacagtctgggagtcaaggatcaggttctggg
tcagggaggccaggcttgtacagagaggaaggcgaggatgacctttatcagtga
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