Scomber scombrus (Atlantic mackerel): 134001930
Help
Entry
134001930 CDS
T10651
Symbol
svila
Name
(RefSeq) supervillin a isoform X1
KO
K10369
supervillin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
134001930 (svila)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Gelsolin / villin
134001930 (svila)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gelsolin
VHP
DUF7904
Motif
Other DBs
NCBI-GeneID:
134001930
NCBI-ProteinID:
XP_062297102
LinkDB
All DBs
Position
20:complement(5249577..5291161)
Genome browser
AA seq
2100 aa
AA seq
DB search
MEEFESPEMQMTAPERQSRARCRPDPQSAIHTEPVYRSVSTTSAPELESKAERIARYKAE
RRRQLAERYGISLDHEPDVDNPSRYTRTQKESEDSERRSKGESVGEDGRDINLSSYNSTS
ATSSRAGRTVPQHGHPDPGYEMGRTRVDSFSERERLMNLENQRRAAPPELPPSSSYMDVT
SLSSTARVPAKDYSVTGVPPSSPKMSRHASLSSPKHGVSPGDLFIEQQAHNILSRHGIRV
RERLVREEGRQRSPELGNVTDAPLYRRQYQHQSQPSTHYHSDPPSPQQVYSHHQPHHHPQ
AQLTRSGLQGGQEGGGYPSYLSMASGAPSRGGQQQEEEIEESEGVKTEGLLKSRKAVLPS
EIRRRERSTEDPRRGRVEEELGMSRVQAEIEDPARGGRRGRWEETEPATHLQAVESRPRE
RDNAIYIQKGVTTSQIQPRATNAGPEGSISSTAFNRSLSDVGGPRAPTQRNLHHQTQDPR
EVREREGFSNGESHQDTRMSVAQLRHSYMESTTTPPTSRKTELEVEEGNRALAGYEAPWR
GERDRGRRTRQYIYPGENRKTSERFRTQPITSAERQETDRSCVSSEFAPAEADEEKLDDL
AKLSVAAKRSLFRELEKNVDGGAPKPRSRNAAVDRRLRRTQDRSRTQPVTTEEVVIAATL
QASSQQSAAAREQAREARQAQETKEAQITKEAQGPKQASKMEEKVQSQSPSQDEPDLCTL
SLAEKMALFNRLAQPPSRVTRTRGDTRQRRANARYQTQPITLGDMEQLQNGAGSRYGHLP
SSSSSSSALRPGGTVSTDHAGDIHIPIGATRVEANPPSSDRPLPACQPDGPARRPQESAD
QQRQTYQVVPKGEEGADLGGGKRKLVSPEGAIRQATLPQPQSGRERREEEEEEELVGVVE
EVEQWLARQRGDRALQSSESHMLQERQEQRGYQREEAHYPVRAISGEPPEPTVVTPRAPS
GSPGSQPPAADTYPDDGGHTTDLFQPDFEDDLSDMMSARHMSIRDRVALLKKSGEQDWRN
RINKKQDVVKAAVDEQHAELWEVEQSFKKKRIADAEMECQQAESHMSIQERKQQIVAQEE
AWKSKGHGAANDSTQFTVAARMVKKGLASPTALQSPVLSKPKTSCPAISKPHEEIKAVPD
LNLESDMKLDKLESFLGKLNSKVSGLPESTITVTEKKVKEVMSLEDETFSKFYRQVEDLP
TITNKVEIDDNFDAIFGTQGAKLTSEMVQHKRAVRPTRNVQASRNPLKMLAAREDIRHEY
TEQRLNIGLLESKRMKAEKMNKNSGFSEVALAGLASKENFSNVNLRSVNISEHMSNNSAV
PYKKLMLLQVKGRRHVQTRLVEPRASSLNSGDCFLLITPHFCFIWTGEFANVIEKNKASE
LANFIQSKRDLGCRSNYVQTIEEAVNSHNHASKEFWKILGGQTSYQSAGTPDEDELYEGA
IVETNCIYRLVEDKLVPDDDFWAKMPRCSLLNPKEVLVFDFGSEMYIWHGKEVTLAQRKV
AFQLAKHLWNGTFDYTNCDINPLDPGECNPLIPKKGQGRPDWAVFGRLTQHNETTLFKEK
FVDWSDSRKTPSPTKYINDHVTDQKEQSTSDQPRAYDASLMLPIHGAPVGTKLDGFNVGR
GYGLVEGEEWRSYEVSTLGVEVWHILEFDYSRVPRQSIGQFHEGDTYVVKWKYMVSAAVG
RRQNPEQLKTAGPGKEKCCYFFWQGRNATVSEKGTSALMTVELDEERGAQVQVQQGKEPP
CYLQCFKGGMVVHSGKREEEEENSQNDWRLYCVRGEVAVEGHLLEVACHCSSLRSRVSMV
LLSVSQALIYLWHGCKSQTNTREVAHTAASKIKEHCPLEAGLHSSSKVTIVECDEGAEPT
GFWEALGRRDRKAYDCMLQDPGRFNFTPRLYQLSSSSGEFTAVEFLYPAREPRHVNSMPF
LQEDLYTASQPALFLVDNHHEVYLWQGWWPQDSESTGSAQIRWDSDRKCAMETVLQYCKE
KNDKKPPKAYLIHAGLEPLTFTNMFPSWEHREDIAEITEREAEVCNQIILVEDVLARLCK
TTYPLSDLLARPLPEGVDPLRLEVYLSDEDFEKALDMTREEYGGLPSWKQVNLKKAKGLF
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatttgaaagcccagaaatgcagatgactgctccagagcgacagtccagagct
cgttgcagaccagaccctcagtccgctattcacacagagccagtctaccgttcagtgtcc
accaccagtgccccagagctagagtccaaggctgaacgaatcgcccgctacaaggcagaa
cgtcgccggcagctagctgagcgctatggcatctctttggatcatgagcccgatgtggac
aatccttcgcgctacactcggacccagaaagagtctgaagactcagagagaagaagtaaa
ggggagtcagttggggaggatgggagagacatcaatctgagttcctacaacagcacttct
gccactagttcaagggcaggacgcacagtgccccagcacggccaccctgacccgggctac
gagatgggtcgaactagagtggactcgttctcagagagagagaggctcatgaacctggag
aatcaacgcagggctgctcctcctgagctgccaccctcttcctcatacatggatgtgaca
tcattgtcctccactgccagggtgcctgctaaggactattcagtcacaggggtgccaccc
agttcaccgaagatgagcaggcatgcttccctctcctcacctaaacatggtgtgtctcct
ggggacctcttcatcgagcagcaggcccacaacatcctcagcagacacggaatcagagtt
agggagaggcttgtgagggaggaaggtcgccagaggagcccagagctgggaaacgttaca
gacgccccgttgtaccgcagacaatatcaacaccagtcccagccttctacacactaccac
tcagacccaccgagcccccagcaggtctactcccaccaccaaccccaccatcacccccag
gctcagctcacccgatctggactgcaaggaggacaggaaggcggtggataccccagttat
ctgtccatggcttctggtgctccatccagaggtggacaacagcaggaggaagagattgag
gagtcggagggcgtgaagacagagggccttctgaagagcaggaaagcagtgctgccttcg
gagattcgacgcagggagaggagcactgaagacccacggagaggaagggtggaagaggag
ctggggatgtccagggtgcaggctgagatagaagatcctgcaagaggaggacggagaggt
aggtgggaggaaacggaacccgccacccatctgcaagcagtggagagcaggcccagagag
cgggataacgccatttatatccagaaaggggtgaccaccagccaaatccaacccagagcg
acgaatgcaggcccagaaggctccatctccagcacagcgttcaatcgctctttatcagac
gtcggaggtccacgagcgccaactcagaggaacctgcaccaccagacccaggatccccgg
gaggtcagggagcgcgaaggcttcagtaatggagagagtcaccaggacacccgaatgtct
gtggcccagctcagacattcctacatggagagcaccaccacccctccaaccagccgcaag
accgagcttgaggtggaggagggcaacagggcgcttgcaggctacgaggccccgtggaga
ggggagagggacagggggcgtagaacccgacagtatatctatccaggggagaatagaaag
acctcagagaggtttaggacacagcccatcacttctgctgagcgccaggagactgatagg
tcctgtgtgagttcagagtttgctcccgcagaagctgatgaagagaagctagatgacctg
gccaagctgagcgtggcagccaagcgctctctctttagggagctagagaagaacgttgat
ggtggagctcctaaaccaagatccaggaatgcagcggtggacaggaggctaagacgtaca
caagaccgatccagaactcagccggtcaccactgaagaggtcgtcatcgccgccaccctg
caggcatcctcgcagcagagcgccgccgcccgggagcaggcgcgggaggccaggcaggcg
caggaaaccaaggaggctcaaatcaccaaggaagctcaaggccccaagcaggcgtccaaa
atggaagaaaaagtccagagtcagagtccgtctcaggacgagcccgacctctgcaccctc
agcctggcagaaaagatggcgctgttcaaccggctggctcagcctccctccagggttacc
cgcaccagaggggacacacgccagcgcagggccaacgctcgctaccagacgcaacccatc
accctgggtgatatggagcagcttcaaaacggtgcaggctctcgttacggacacctccct
tcttcatcatcatcctcctccgctctgagaccaggaggcaccgtctccaccgaccacgcc
ggagacatccacatacccataggtgccacccgggtcgaggccaaccctcccagctctgac
aggcctctgcccgcttgccaaccggacggcccggcccggaggccccaggagtcagcggac
cagcagaggcaaacttaccaggtcgtccccaagggagaagaaggagctgatctgggtgga
gggaagaggaagctggtttctcctgagggggcgatcaggcaggcaactctgccccagccc
cagtctggaagagagaggagggaggaggaggaggaggaggaattggtgggggtggtggag
gaggtggagcagtggctggccagacagaggggagacagagctttgcagagctcagagagc
cacatgttacaggagaggcaggagcagagggggtatcagagggaggaagcacactaccca
gtcagggccatcagtggagagccgccggagcccactgtggtgacacccagagcaccgtct
ggttcgcccgggagtcaacctccagcagcggacacttacccagacgacggcggacacaca
accgacctgttccagcctgactttgaagacgatctgagcgacatgatgagtgccagacac
atgtccatcagagacagggtggccttgttaaagaagagcggcgagcaggactggaggaac
aggatcaataagaaacaggatgtggtgaaggctgctgtggacgaacagcacgctgagctg
tgggaggtggagcagagcttcaagaagaagaggatcgctgatgctgagatggagtgtcag
caggccgagtctcacatgtccatccaggagaggaaacagcagatagtggcccaggaggag
gcctggaagagtaaaggccacggagccgccaacgactccacccagttcaccgtggctgcg
cgcatggtgaagaaaggtttggcttcccccactgccctacagtctccagttctgtccaaa
cctaaaaccagctgccctgccatctccaaaccacatgaagagatcaaggccgtaccagat
ctgaacttggagtcagacatgaagctggataaactggagtcattcctgggcaagctcaac
agtaaagtttctggactgccagaatctaccatcacagtgacagagaagaaggtaaaggaa
gtgatgagcctcgaagatgaaaccttttccaagttctaccgccaagtggaggacctgccc
accatcaccaacaaggtggagatagacgacaactttgacgccatcttcggcactcagggg
gcaaagctaacgtcagagatggtgcagcataagcgagcggtgcgtccgacgcgtaacgtc
caggcgtccaggaaccctctgaagatgctggctgccagagaggacatcagacacgagtac
acagagcagaggctcaacatcggcctgctggagagcaagaggatgaaggcagagaagatg
aataagaactctggtttctctgaggtggctctggccggtctggccagcaaagagaacttc
agcaacgtcaacctacgtagcgtcaacatctcggagcacatgtccaacaacagcgccgtg
ccttacaagaaactcatgctcttgcaggtcaaaggccgtcgccacgtccagaccaggctg
gtggaacccagagcatcctccctgaacagcggcgactgtttcctgctcatcactcctcac
ttctgtttcatctggaccggagagttcgccaacgtcatcgagaagaacaaggcttcagag
ttggctaacttcatccagagcaagagagatttgggttgtcgttctaattacgtccagacc
atcgaggaggccgtcaactcgcacaaccacgcctccaaagagttctggaagatcctggga
ggacagacgagttatcaatcggcaggaacgccagatgaagacgagctgtacgagggcgcc
atagtggagacgaactgcatctaccgtctggtggaggacaaactggttccagatgatgat
ttttgggccaagatgccccgctgctccctgctcaacccaaaagaggttttggttttcgac
tttggcagtgagatgtacatatggcacgggaaggaagtgacgctggctcagaggaaggtg
gccttccagctggcgaagcacctgtggaatggcaccttcgactacaccaactgtgacatc
aacccgctcgacccgggagagtgcaacccgctcattcctaagaaaggtcagggtcgtcct
gactgggcggtgttcggcagactgactcaacacaatgaaaccaccctgttcaaagagaag
tttgtggactggagcgattccaggaaaacacccagccccacaaaatacattaacgaccac
gtcacagatcagaaggagcagtccacgtctgatcagccccgtgcgtacgacgcctccctg
atgctgcccatccatggagcgccagtcggcaccaaactggacgggttcaacgtggggcga
ggctacggcctggtggagggggaagagtggcggagctacgaggtcagcacgctgggggtg
gaggtgtggcacatcctggagtttgattacagccgcgtgccgcgccagagcatcggccag
ttccacgagggagacacctacgtggtgaagtggaagtacatggtcagcgctgcggttggg
aggagacagaacccggagcagctgaagacagcggggcccgggaaagagaagtgctgctac
ttcttctggcagggccgcaacgccaccgtcagcgagaaaggaacatcggctctgatgacg
gtggagctggacgaggagaggggagcgcaggttcaagttcagcaaggtaaggagcctccg
tgttacctgcagtgcttcaaaggagggatggtcgtccactcagggaagagagaagaggaa
gaggaaaactcccagaatgactggcgtctgtattgtgtgcgtggggaggtggcagtggag
ggccacctgctggaggtagcctgtcactgcagcagcctgcgttccagggtctccatggtg
ctgctgagtgtcagccaggctctcatctacctgtggcacggctgcaagtctcagactaac
acgcgggaggtggcgcataccgcagccagcaagatcaaagaacattgccctctagaagca
ggtctccacagcagcagcaaggtgaccattgtggaatgtgatgagggagcagagcccacg
ggattctgggaggccctcgggaggagggacagaaaagcgtatgactgcatgctgcaagac
cccggcaggtttaacttcacgcctcgtctctaccagctgagcagcagctccggggagttc
acagctgtggagtttctctatccggccagagaacccaggcacgtcaactctatgcctttc
ctgcaggaggacctgtatacagcttcccaaccagccctgttcctggtggacaaccatcat
gaggtgtacttgtggcagggctggtggcctcaggacagcgaaagcaccggctccgctcag
atccgctgggactcagacaggaagtgtgcgatggagacagtgttgcagtactgtaaagaa
aagaacgacaaaaagcctcccaaagcgtatctgatccacgccggtctggagccgctcacc
ttcaccaacatgttccccagctgggagcacagagaggacatcgctgagatcactgagagg
gaggcggaggtgtgtaaccagattatcctggtggaggacgtgttggccaggctgtgtaag
accacataccctctgtcggatctgctggcccggccgctgcccgagggcgtcgaccctctt
cgcctggaggtctacctgtctgatgaggactttgagaaagccctggacatgaccagagag
gagtacggaggtctgcccagctggaagcaggtgaacttgaagaaagccaaaggacttttt
taa
DBGET
integrated database retrieval system
