Scomber scombrus (Atlantic mackerel): 134001934
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Entry
134001934 CDS
T10651
Symbol
arhgap12b
Name
(RefSeq) rho GTPase-activating protein 12b isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134001934 (arhgap12b)
Membrane trafficking [BR:
ssco04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
134001934 (arhgap12b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-WW_linker
RhoGAP
WW
PH
SH3_1
PH_9
SH3_9
SH3_10
Motif
Other DBs
NCBI-GeneID:
134001934
NCBI-ProteinID:
XP_062297107
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All DBs
Position
20:5021640..5078365
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AA seq
870 aa
AA seq
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MADREGVPIAPGHVYIEVEYDYEYKAKDKMVSIRQGECYMLVKKTNEDWWQVKKEEGTKA
FYVPAQYVREVRRALMPPQKPMLRAKPTVLDICRASNENLNRPQPEMSSFGRPSPSSTPS
PSSDRVTPPALPKDANQNVGSPRHCKVVAELVLLHNNNNHHLANNSTLPRTRADSPPLKV
GNNHNKSPDCVKTSPPGDLPGDGLNKIRNDSESGDELSSSSTEHMQTTSPTVQGRSDSPV
YTNLQELKISQSSLPPIPSGSPLHILGDWETHKDLSGRHFYYNRASGERTWKPPRTRDTS
SSTSSSIRGDSQGTAESEPLSSEENCHSTHSSQSDSQYGSPPRGWSEELDEHGHTLYVSE
YTQEKWIKHVDEQGRPYYYSADGSRSEWELPKYNISPQSGEVPKSRSLERKQQDPIVLTK
WRHSTYVLDLNDKFSFKLWRFASDPHKRRFRLSLYRDKECAPAPRQSSPDSDSCPSSPKH
PSTPSEKCGVLNVTKITENGKKVRKNWTSSWTVLQGSSLLFAKGQGGSTSWKFGSNQSKP
EFTVDLRGGSVDWASKDKSSKKHVIELKTRQGTELLIQSEIDSVINDWYRALTETINTHA
WESDEAIEEDMPESPGAEKQDKEKDHRDSKKNRVMKTSVSMDSSDQKKTRLKLKKFLTRR
PTYQAVRDKGYIKDQVFGCSLTSLCQRENTSVPNFVTMCIDHVESTGLSIDGLYRVSGNL
AVIQKLRFAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCS
DYKQRLNSIKDLIKKLPKPNHDTMQILFKHLRRVIDHGEANRMTTQSVAIVFGPTLLRPE
TETGNIAVHMVYQNQIVELILIEYESIFGR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagagagggggtgcccatcgccccgggccacgtctacatcgaggtggagtat
gactacgagtacaaggccaaagacaagatggtgtccatccggcagggagagtgctacatg
ctggtgaagaagaccaacgaggattggtggcaggtgaaaaaggaggagggcaccaaggcc
ttttatgtaccggcgcagtacgtcagggaggtgcgtcgggccctcatgcctccccagaag
cctatgttgagggccaagcccactgttttggatatctgccgggcatccaatgagaacctc
aacaggccacagccggaaatgtccagctttgggcgcccgtcgccctcctccaccccgtcg
ccatcttccgaccgggtcacgccgccggctctgcccaaggatgctaaccagaacgtgggg
agcccccgccactgcaaggtggtagctgaactggtgctccttcacaacaacaacaaccat
cacctcgccaacaattccacgttgcctcggacgcgggccgactcgcctccgctcaaagtc
gggaacaaccacaacaaaagtccggactgtgtcaagacctctccgccgggcgacctgcca
ggagacgggcttaacaagatccgcaacgactcggagtctggggacgagctgagcagcagt
tcaacggaacacatgcagacaacatcgccaacagttcagggccggtccgactcaccggtc
tacactaacctccaggagctgaagatctctcagtccagcctgccgcccatcccctccggc
tcccctctccacatcttgggcgactgggagacccacaaagacctgagcggcaggcatttc
tactacaaccgggccagcggtgagcgcacctggaaaccgccacgcacacgggacaccagc
agcagcaccagcagcagcatcagaggagacagccagggcaccgcggagagtgagccgctg
tcctcagaggagaactgccacagcacccactccagtcagtctgacagccagtatggatcg
ccccctagaggctggtccgaggagctggacgagcacggacacacactctacgtctctgaa
tacacacaggaaaagtggataaagcatgtggatgaacagggccggccctactattacagt
gctgatggatccaggtcagaatgggaattgccgaagtacaacatctcccctcagtccggg
gaggttcccaagagtcgcagtctagagaggaagcagcaggaccccatcgtcctcaccaag
tggagacacagcacctacgtcttagatctcaacgacaagttctctttcaaactctggcgg
ttcgcttccgacccgcacaagaggagattccgtctctctctttaccgcgataaagagtgt
gctccggcgcccaggcagagctctccagactctgactcctgcccctcatctcctaagcac
ccctcgaccccgtcggagaagtgcggagtcctcaatgtcacaaaaatcacagagaatgga
aagaaagtcaggaagaactggacgtcctcgtggacggtgctgcagggttcctctctgctc
tttgccaagggtcagggcggtagcactagctggaagttcggcagcaaccaatcgaagccg
gagtttaccgtcgatctgcgtgggggttcagtggattgggcctccaaagacaagtccagc
aagaagcacgtcatcgagctaaagacccgtcaggggacagagctgctgatccagtcagaa
attgacagcgtcataaatgactggtaccgggccctcacagagaccatcaacacacacgcc
tgggagtcagatgaagccatcgaggaggacatgcctgagtctcctggagctgagaaacag
gacaaagagaaagaccaccgggactccaagaagaacagagtgatgaagacctctgtgagc
atggactcatcagaccagaagaaaaccaggttgaagctgaagaagttcctgacacgtcga
cccacctaccaggccgtcagagacaagggttacatcaaagatcaggtgtttggctgcagt
ctgaccagcctgtgccagcgggagaacacatcagtgcccaacttcgtcacaatgtgtatc
gaccacgtggagagcacaggtctcagtattgacggcttgtacagagtgagcggtaacctg
gcagtgatacagaagctccgctttgctgtgaatcacgatgagaaggtggatctgaatgac
agtaagtgggaagacatccacgtcaccaccggagctctcaagatgttcttcagggagctt
cctgagccgctcttcacatacggatccttcaacgacttcgttaacgccattaaatgctcc
gactacaagcagcgactgaattcaatcaaagacttaatcaagaagttgccaaaaccaaac
cacgacacaatgcaaatcctcttcaaacacctgcggagggtgattgaccacggagaggcc
aaccgtatgaccacccagagcgtggccatcgtgttcggacccacgctgctccgaccggaa
accgagacgggcaacatcgcggtccacatggtgtaccagaaccagatagtggagctcata
ctgatcgaatacgagagcatcttcggcaggtag
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