Scomber scombrus (Atlantic mackerel): 134001957
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Entry
134001957 CDS
T10651
Name
(RefSeq) cadherin-7-like isoform X1
KO
K06799
cadherin 7, type 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
134001957
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Major cadherins
134001957
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
134001957
NCBI-ProteinID:
XP_062297149
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Position
20:20170358..20271841
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AA seq
800 aa
AA seq
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MMGWCCSGICRALTLLALLLPLRERGCWGLNPSSGDLEKSPHSDPAPWEVLHRHKRSWVW
NQFFVLEEYTGNEPLYVGKLHSDVDKGDGKVKYVLSGEGSTSIFTIDENTGDIHATKRLD
REAQAYYTLQAQAVDRLTNLPVEPRSEFVVKVQDINDNEPKFLDGPYLAGVPEMSPLGTM
VVQVAATDADDPTYGNSARVVYSIIHGQPYFSVEPKTGVIRTALPNMDRETRDQYVLVIQ
AKDMVGQMGGLSGTTSVTVTLTDVNDNPPRFPHKNYQYTVLESLPVQSVVARIKATDVDI
GSNAEMDYRIMDGDGPGMFNITTDEDTQEGVIILLKPLDYETKSSFSLRIEATNRNIDSN
FLSLGPFSDTTSVKVTVEDVNEPPVFSTPLSKMVVSEDAKVGTSIGRVSAHDPDTSNSGI
RYSIDRNTDLERFFNVDALSGVISTAKPLDREANSVHNLTIFGIESQDPAQIGKGITLIT
VLDINDNAPVFAIDYETLLCENAMPGQVIQTISAVDKDEPLSGHRFYFSLAAPVAGNLNF
TLRDNKDNTASILTKRGGFRRREQPMYRLPVLIVDSGSPALSSTNTLSVRVCDCDSDGVA
LSCGAVAYTSTGLSTGALLAILGCIITLLVMVLLIVTMRRRRKEPLILEEERDIRENIVR
YDDEGGGEEDTEAFDMVTLRNLNVIRDPNVRRDVTPDTPTFFHYPSATRPTYKSLPDNVV
FREFIWERLKDADVDPSAPPYDSLQTYAFEGSGSIAESLSSLESLSTDSDQNYDYLSNWG
PRFKKLADLYGNSDGTSVFS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgatggggtggtgttgctcaggcatatgcagagccctgactctcctggcactcctgctt
cccttgcgggagaggggctgctgggggctaaatcccagctctggggatctggagaagtcc
ccacactctgatccagccccctgggaggtcctgcacaggcacaaacgcagctgggtatgg
aaccagttcttcgtgttagaggagtacacgggaaatgagcccctctatgttggcaagcta
cactcagatgtggacaaaggagatggcaaggtgaagtatgtattatcgggggagggctcc
acctccattttcaccattgatgagaacacgggagacatccacgccacaaaacgcctcgat
cgggaagcacaggcctactacacgcttcaagctcaagccgtagaccgactcaccaattta
cccgtggagcccaggtctgagtttgtggtcaaggtccaggacatcaatgataatgagccc
aagtttcttgatggaccgtacttggcaggtgtgccagagatgtcacccttaggaaccatg
gtggtgcaagtggcagccacagatgcagatgaccccacgtatgggaacagcgccagagta
gtctacagcatcatccacggacagccttacttctcagtggagcccaagactggtgtcatc
aggacagctctgcctaacatggacagggagacgagggaccagtatgtgctcgtcatccag
gccaaagacatggtcggccagatgggcggcctctccggcacaacctccgtcactgtcaca
ctcaccgatgtcaacgacaacccgcctcggttccctcacaaaaactatcagtacacagtc
ctggagtcgctgcctgtgcaatcagtggtggccagaatcaaagcgactgatgttgatata
ggctccaacgcggagatggactacaggatcatggatggcgatgggcctggcatgttcaac
ataacaacagatgaggacacacaagagggggtcatcattcttctgaagcctctagactat
gaaacaaagagcagcttttctctgagaatcgaagccacaaacaggaatattgactccaac
ttcttgagcttgggcccatttagcgacacgacatcagtcaaggtgacagtggaagatgtg
aacgagccacccgtcttttccacgccacttagcaagatggttgtttcggaggacgccaaa
gtgggcacctcaatcggtagagtgtccgcacatgacccagatacctccaacagcgggatc
aggtactccattgacagaaacacagacttggagcgcttctttaacgtggatgccttaagt
ggggtcatcagcacagccaagcctctggaccgggaggccaactcagtccataaccttacc
atctttggcatcgagagccaggatccagcccaaattggaaaaggcatcactctcatcacg
gtgctggacataaatgataatgccccagtctttgccatagactatgagactctcctctgt
gaaaatgccatgccaggacaggtgatccagaccatcagcgccgtggacaaggacgaacct
ttgagcggtcatcgcttctatttttccctggctgcacctgttgccggcaatctcaacttc
actctacgagataacaaggacaacacagcgtccatactgacaaaaagagggggtttcagg
agacgggaacagccaatgtatcggctgcctgtgttgatcgtggacagtggaagtcctgcc
cttagcagcacaaacacactctcagtgcgtgtgtgtgactgtgactctgacggtgtggcc
ttgtcatgtggagctgtggcatacacttcgactggcctgagcactggtgccctcctcgct
attttaggctgcatcatcacacttctggtgatggtactgttaattgtgacgatgcgtcgg
aggaggaaggagcctctgattctcgaggaggagagagacatcagagaaaacatcgtccgt
tacgacgacgagggcggcggagaggaagacacggaggctttcgatatggttactctgcgc
aatttgaacgtcatcagagatcccaacgtgaggcgagatgtcacaccggatacgcctacc
ttctttcattacccatcagctactcgtcctacctataaatccctgccggacaatgtggtg
tttcgagagtttatttgggagcgacttaaggatgctgatgtggacccgtcagctccaccc
tatgactctctgcagacatatgcttttgaaggcagtggctccatagcagagtcgctaagc
tcactggaatcactaagtacagactcagatcagaactatgactatctcagcaactgggga
ccacgcttcaaaaagctggctgacctgtacggcaacagcgatggcaccagtgtcttctca
tag
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