Scomber scombrus (Atlantic mackerel): 134001958
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Entry
134001958 CDS
T10651
Name
(RefSeq) rho GTPase-activating protein 21-like
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134001958
Membrane trafficking [BR:
ssco04131
]
Endosome - Golgi transport
Others
Others
134001958
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
134001958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PDZ_6
PH
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
134001958
NCBI-ProteinID:
XP_062297151
LinkDB
All DBs
Position
20:complement(19101852..19148660)
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AA seq
2070 aa
AA seq
DB search
MLAQRNGLPPGCKPVPLKDHPDLRDVDVSAEGCCSLSPSSSSGGCPWARLAGVDGCLSEP
YCLWFQLLARAYWGEVELGLTSPNRSVSWARLREASRKNCVRSRAKQKDGRDQSEASAMA
SPGVEEEPFSWPGPKTLHLRRTSQGFGFTLRHFIVYPPESAVHNSLKDEDNGSRGRQRNR
LEPMDTIFVKQVKEGGPAHGAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDASLELCV
MPKDEDILQLAYSQDAYLKGNEAYSGNAQNIPEPPPICYPRIEVKATGMAQSPEPATVDE
THRGPAQGPGIRGGSTEKTYRVEIPVAPSPPPQQTSKSQTVVCVFNENVRTVAMPPDPVD
RGSRLARAGPSHRTEENRYSPQADASPARPRPLIPSVPGGAQLQYPSSHPTESPVYSPSS
SSRPGGIYPETLTPPVRTPLTPASPDAFSTAVSPNSNHYSPSPTASSTSPHQNIDWRNYT
TYKDYIDAKRLHTYGCRTIQERLDSLRAAASSSSAYTQQRTSPLPSTSPRGAEGSQVRRR
STSNDRGVDAISQDTAVVTPLRSASQERLGGGAERLTPTRNWPRSASQDALPFSTPTGVA
KPRARSCDYLGHQPGELGGVVSGDRTGLDDSLMLCRGEEARASRQGSGLRALPHLNRSLT
GQVEEGRGLYNSPSAAPVFTKGTTDSALPLRTDSVIMRPSRLPVKNAISDPSPALSATKT
TDPLKDQRANIIGNHLGYTPPLHLQLRGRADSLKMESRSEAGLAARSSSCSGPSSKLPTQ
RQLQSGVGTSTTNGATTLKPKASSSTNTPVRTNGGLAEGVEGPDATVVVLRRDKNSAPLH
IRPPSYVLAVNDNRGGVTHKSPPLVKAGSEDGAMCWMSNDSFRDMHVRRLGDTRHKSGSD
NLDESLDSIPFIDEPSSPSTDQDIAHIPASAVISGAPIITTIPPSPPSPCPLIRRQLSHD
QDSLRLTIIESDSGTKTERSKSYDEGLDNYREESRGRSLIPGLKSLRKATDRSSEDSGSR
RDSSSDVFCDATKEGLLHFKHLNTDKGKRVGGGMRPWKQMYAVLRGHYLCLYKDKKEGQA
HANCQAVDEPLPISIKACLIDISYSDTKRKNVLRLTTSDCDYLFQAEDREDMLAWIRVIQ
ESSNLDEENAAFTSHDLISRKIKEYNTLMSPTGSKTEPSPKPSRQSLSIRHTLLGGKGET
KAVSPHSPKPEQERKNMHKDDTSPPKDKGTWRKGIPGLMRKPFEKKPSPGVTFGVRLDDC
PPAHNNKFVPLIVEVCCKLVEDRGLEYTGIYRVPGNNAAISNMQEELNNKGMNDIDIQDD
KWRDLNVISSLLKSFFRKLPEPLFTNDKYTEFIEANRIYDPVERLKVLKRLLHELPDHHY
ETLKFLSAHLKTVADSSEKNKMEPRNLAIVFGPTLVRTTEDNMTHMVTHMPDQYKIVETL
IQNYDWFFTEVGNGDPVTMSHEESAVESQPLPNIDHLLTNIGRTGTSQGEVSDSPTSDSA
KSKGSWGSGKDQCSRELLVSSIFAAASRKRKKSKEKPQPSSSDDDLDSVFSKKEIPGQKP
NHHSLQTEAQSETRPSPNTKPNPKQQVRVEERKENGRTVELTPKAKRDHRNSSFLKEKTP
PKHPSPSPSPSPKISCSPNIKYQKATGGKSSISDPPSQLDENTSDLGTMSSGASVQRSRP
KKWTGGVSPDLPAGACLGPGAAAGASAGAEVSSITSDYSTTSSITFLTGAESNVLSPELQ
GGEEADDERSELISEGRPMETDSESDFPVFAPGGGSSQSTPCPDQSQEKSEAKSGAAEAS
TTPKLEARRLFPSHRMIECDTLSRRWSLRQKTDSESSVEGGLASGERTEGRAESSTRLSR
VLEVMKKGRSTSSLSSSSRSESERTEPAWHLKITERLKFRLRTSADDMFTQKSRTPDARG
KKKNIRRRHTMGGQRDFAELAVINDWREQGGVDQAAELSALDRLKPRCSSQDFSIRDWIS
RERCKGGGSEPSVEVAPKAVPEDDHTEAQNVPPERERPPPSASPGAQPVTGEHVNGSGLQ
SKSKASIGADAHPHKLSGTQVVRSRFYQYL
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgctagcccagaggaacgggctacctccaggctgtaagccggttcctctgaaggaccac
cctgacttgcgggatgtggacgttagcgccgaaggctgctgctccctctctccttcctca
tcatctggaggttgtccctgggctcggctggccggggtggacggctgcttgtcggagccg
tactgtctttggttccagcttttggccagagcctactggggggaagtggaactggggctc
accagtcccaaccgcagcgtgtcctgggctcggctacgagaagcctccagaaagaactgt
gtccgatctagggccaagcagaaggatggacgcgatcagagcgaggcttcggctatggcc
tctccaggtgtggaggaggagcctttctcctggccggggcccaagacgcttcacctgcgc
cgaacctctcaaggcttcggcttcacgctgcgacacttcatcgtctacccacctgagtct
gccgtccacaactctctgaaggatgaagacaatggcagtcgagggagacagcgcaaccgt
ctggagccaatggacaccattttcgtcaagcaagtgaaggagggaggccccgcccacgga
gctggactctgtacaggggatcggatagtgaaggtgaacggagagagcatcatcggaaag
acctactcgcaggtcatagccttgatccaaaacagtgatgcctcactggaactctgtgtg
atgccaaaggatgaggacattttgcagctggcttattcccaggatgcatacctcaaggga
aatgaggcatacagtggaaatgcccagaacatccccgagccccctcccatatgctaccct
cgaatagaagtcaaggctacgggcatggcccagtcaccggagcctgccacagtcgatgag
acccatcgagggccggctcagggaccaggaatacgtgggggctcaacagaaaagacctac
cgggtggaaatccctgttgcaccgtctcctccaccccaacagacgtcaaagtctcagacg
gtggtgtgtgtctttaatgagaatgtgaggacagtagccatgccccctgatccagtagac
agggggtcccggttggctcgggctggcccaagccacaggacagaggagaaccggtacagt
cctcaagcagacgcaagtccagctagaccaagaccccttattccatcagtacctgggggt
gcacagttgcagtatccctcttcccacccaacagaaagccctgtctactccccctcctca
agttctagacctggcgggatctatcctgaaaccttaactccacctgtacggacacctctc
actcctgcctcaccagatgcattctctactgccgtctcccccaactccaaccactactca
ccctccccaacagcttcctccacctctccacaccagaacattgactggagaaactacacc
acctataaggactacattgacgctaagaggctgcacacttacggctgccgcaccattcag
gagcgcttggacagcttgcgtgccgctgccagttctagctctgcctacacccagcaacgt
acatcgcctctgcctagtaccagtccgagaggggcagagggctctcaggtcagacggagg
agcacatccaatgaccgtggggttgatgcaattagccaggatactgccgtggtaactcca
ctacgaagtgcctcccaggagaggctcggaggtggtgcagagagactgacaccaaccagg
aactggcctcggagtgcttcccaggatgctctgcctttctctacccccacaggggtcgcc
aaaccacgggcgcggtcttgtgactacctgggccaccagcctggagagctgggtggtgtt
gtctctggagacaggacagggttggatgacagcctgatgctgtgccggggagaggaagct
agagccagcaggcagggatcaggcctgagagctttacctcatctgaacaggagtctcact
ggacaggtggaagaagggcgaggattatataactcaccttcagccgctcctgtgtttact
aaaggtacgacagattctgcactaccgttaaggacagacagtgtcattatgagaccttca
cgtctgcctgtcaaaaacgccatctcagacccctcacctgccttatccgccactaaaacc
acagaccctcttaaagaccaaagagctaacatcatcggcaaccacctgggctacacccct
cctcttcatttgcagctcaggggcagggctgacagtctgaaaatggagagcaggtcagag
gctgggttggcagccagatcctcttcttgctctggtccctcctctaaactgcccacgcag
agacaactacaaagcggagttggtacatccaccactaatggagctacgaccctaaagcca
aaagcctccagttccaccaacacccccgtacggactaatgggggtcttgcagagggcgta
gaaggacctgatgcaacagtagtggtcctaagaagggataaaaactctgcaccccttcac
attcgccctccatcctacgttctagccgtcaatgacaaccggggaggagtgactcataag
tcaccaccactggtgaaggccggctctgaagatggagcgatgtgctggatgtcgaatgac
agctttagggacatgcatgtaaggaggctgggggacacgcgacataagtcgggctctgac
aacttggatgaatccctggattctatccccttcatagatgaaccatctagtcccagtact
gaccaggacatcgcacacattcctgcctcagctgtgatatctggagcacctatcatcacc
accatcccacccagccccccttctccgtgccctctcattcgtcgccagctgtcacatgac
caagattctctccgtctcacaattattgagtcagattctggtactaaaactgagcggtcc
aagtcctacgatgaaggcctggataactatcgggaagaaagcagagggaggtccttaata
cctggtctcaaaagtctgaggaaggcgacagacaggtcgtcagaagactcaggctccagg
agagattcttcatcagacgtcttctgtgacgccaccaaggagggtttgctgcatttcaag
catcttaacacagacaagggcaagcgcgtgggaggcggtatgcgcccctggaaacagatg
tacgccgtgttgcgaggccactacctctgtctgtataaagacaaaaaggaggggcaggct
catgccaactgtcaagcagtagacgagcccctgccaatcagcatcaaggcctgtctgatt
gacatctcctatagcgacacgaagcgaaagaacgtgctgcggctgaccacgtcagactgc
gactacctgttccaggctgaggaccgagaggacatgctggcctggatcagagtcatacag
gagagcagcaacctggatgaggagaacgcagcctttactagccatgacctcatcagccgg
aagatcaaggagtacaacaccttaatgagcccaacgggcagcaagacagagccgtcgccc
aaaccatcacggcagtcgctaagcatcagacacacgctgctgggaggtaaaggagagacc
aaagcagtgagtccacactcgcccaaaccggagcaggagagaaagaacatgcacaaagat
gacaccagccctcccaaggataaagggacatggaggaagggcatcccggggcttatgagg
aaacctttcgagaagaagccgtctcctggagtcacgtttggagtgagactggatgactgt
cctcctgcacacaataacaagtttgtgcctctgattgtagaggtgtgttgtaagctggtg
gaggacagagggctggagtacacaggcatctacagagtccctggaaacaacgcagcgatc
tctaacatgcaggaggagctcaataacaagggcatgaatgacatcgatatccaggatgat
aaatggagggatctcaatgtgatcagcagtttactgaagtccttcttcagaaagcttcca
gagccattgttcacaaatgataagtacacagagttcatagaggccaacagaatatatgat
ccagtggagagactgaaagtgctcaagaggctgcttcatgagttacctgatcatcattat
gaaaccctcaagtttctgtcagctcatcttaaaactgtcgctgacagctcagagaagaat
aagatggaaccaaggaacctggccatcgtgtttggtccaactctggtgcgcaccacagag
gacaacatgacccatatggtgactcacatgcccgaccagtacaaaatagtagagaccctc
attcaaaattatgactggtttttcactgaagttggcaacggagatccagtgactatgtcc
catgaagagagcgcggtggagtctcagcctcttcccaacatcgaccacctgctcaccaac
atcggtcgcacgggaacatcgcagggtgaagtatcagattcaccgactagtgactcagct
aagtcaaagggttcctggggctcagggaaggaccagtgcagtcgagagctcctggtctcc
tcaatctttgctgcagccagccgcaaaagaaagaagtcaaaggagaagccgcagcctagc
agctcagatgatgatctggattcagttttctccaagaaggaaatccctggccagaagccg
aaccatcacagcctgcagaccgaggcgcagagcgagactcgccctagccccaacacaaaa
cccaacccgaagcagcaagtacgagtagaggagaggaaagagaatggaaggactgttgag
ctgactcctaaagccaagagagatcataggaactcctcattcctgaaggagaaaactccg
cctaaacacccctcaccttccccctccccatcccccaaaatctcttgctctcccaacatc
aaataccaaaaagcaacaggggggaagtcctccatatcggatcccccgtcccagctggat
gaaaacacctcagacctcgggaccatgagctccggagcatcagtgcagaggtcacggccg
aaaaagtggacaggaggagtttcccctgacctgccagcaggagcatgcttgggaccggga
gcagctgcgggggcgtcggccggtgcggaggtgagctctatcacctccgactactccacc
acttcttccatcaccttcttgaccggagcggagtcgaacgtgctcagcccagagctgcag
ggtggggaggaggcagacgacgaacgcagcgagctcatcagtgagggacgacccatggag
acggacagcgagagcgacttcccggtttttgccccgggaggtggcagcagccagtccaca
ccctgcccagaccagagtcaggaaaaaagtgaagcaaagagtggggcagctgaggcgagc
accacacccaaactggaagcaaggcgcctttttccctcgcacagaatgatcgagtgcgac
accctctccagacggtggtccctaagacagaaaaccgacagcgaatcatcggtggaaggt
ggtcttgcgagtggggagcgtactgagggtagggcggagtcttccacccgactgtctcga
gtcctggaggtgatgaagaaggggcggtccacaagcagcctcagctcatcttcacgcagc
gagtcggagcgtactgaaccagcctggcaccttaagatcactgagcggctcaagttcagg
ttacgcacatctgccgacgacatgttcacccagaagagccgaacccctgacgctcgaggc
aagaagaagaacatccggcggaggcacaccatgggcgggcagagggatttcgcagagctg
gcggtcatcaacgactggagagagcaaggaggagtggaccaggcggccgaactgtcggct
ctggaccgactcaagcccagatgctcctctcaagacttctccatccgggactggatcagc
agagagcggtgcaagggcggaggatcggagcccagcgtcgaagtcgctcccaaagccgta
ccagaggacgaccacacagaagcccagaacgtacctcccgaaagagaaagaccccctccc
tctgcctctccgggcgctcagccggtaacaggggagcacgttaatggtagcgggctgcaa
agcaaaagcaaagcctccatcggggcggacgcgcacccacacaaactctctggaacacaa
gttgtccgctcacggttctaccagtatctgtga
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integrated database retrieval system
