Scomber scombrus (Atlantic mackerel): 134001959
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Entry
134001959 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: NEDD4-like E3 ubiquitin-protein ligase WWP1
KO
K05633
NEDD4-like E3 ubiquitin-protein ligase WWP1 [EC:
2.3.2.26
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134001959
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134001959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134001959
04121 Ubiquitin system [BR:
ssco04121
]
134001959
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134001959
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134001959
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
HECT type E3
134001959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
134001959
NCBI-ProteinID:
XP_062297152
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All DBs
Position
20:complement(7443541..7465070)
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AA seq
972 aa
AA seq
DB search
MATASSRAESSHNHRGTSQLHAIVSCAKIKRKKSLFGTAIYVEVTAEGESRRTAKSYSSS
SPKWDERLTLNVTPHTKVDFKVWSHHTLKADALLGKAMLDLTQALEQHDRKLENVKEVLK
LSMEQKGAVVATGELTVYLDGLTVTDQEELAPLTNGNAANGTKVQQNGDAIHENGDSSSS
SSRAANSTVNGTDSEPRSGSCSASNGVDGQVPPVPVSPALSHIVNGDSTPNSTPVHQPSD
SDTESRTVNGESCDAAPGPSPATTGDALPPADDHEDCNQSAAPPDSDTAPNSTSQPLPTS
TQAPASSTAAKPTDGATAASATAAAPPAAAATAAAASSTFTSPAQGGNTITNSSSSSPPP
PALGETNASGAGGSSSSSNTTATTDGAKPRQQVPNAGASDPLPPGWEQRKDPHGRTYYVD
HNTRTTTWERPQPLPPGWERRVDDRGRIYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQ
LQGAMHQFNQRYLYSASMMSAENDPLGPLPPGWERRVDSNDRVYFVNHNTKTTQWEDPRT
QGLQNEDPLPEGWEIRYTREGVRYFVDHNTRTTTFSDPRTGKSSVTKGPQIAYERSFRWK
LAHFRYLCQSNALPSHVKITVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGG
LAREWFFLLSHEVLNPMYCLFEYAGKSNYCLQINPASAINPDHLSYFCFIGRFIAMALFH
GKFIDTGFSLPFYKRMLNKKLILKDLESIDPEFYNSLIWIRDNNIEECGLEMYFSVDMEI
LGKITSHDLKPDGTNVLVTEENKEEYISLMAEWRFSRGVEGQTKAFLDGFNEVVPLQWLQ
YFDEKELEVMLCGMQEVDLQDWQRNTVYRHYTRNSKQIIWFWQLVKEVDNEVRLRLMQFV
TGTCRLPLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSFDQLKEKLL
FAIEETEGFGQE
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcctcatcgagagcagagtctagccataaccacagaggaacatcacagctc
catgccattgtttcctgtgccaaaatcaagaggaagaagagcctgtttgggacggccatt
tatgtggaggtgacagcggagggggagtcgcgacgtacagcgaagtcctacagctcctcc
agtcctaaatgggatgagaggctcactctgaatgtaacaccgcacacaaaggtggatttc
aaagtatggagtcaccacaccctgaaagcagacgctctgctgggcaaagccatgctggac
ctgacacaagccttggagcagcatgacagaaaattggagaatgtgaaggaggtgctgaag
ctgagcatggagcagaaaggagctgtggtagcaacgggggagctcaccgtctacctggac
ggactgactgtcactgaccaggaggagctagcaccactcaccaacggcaatgcagccaat
ggcaccaaagtccaacagaacggtgacgccatccacgaaaatggagactcgtcttcctct
tcctcaagggctgccaacagcacagtgaatggtaccgactcagagcctcggtcaggttcc
tgttcagcctccaacggcgtggacggtcaggtgcctccagttcctgtaagccccgctctc
tctcacatcgtcaacggagactccacacccaactccaccccagtccaccaaccatcagac
agtgacacagagagtaggacagtcaacggggagtcctgtgacgctgctcccgggccatcc
cctgccacaacaggtgacgcgctgccccctgcagatgaccacgaggactgcaatcaaagt
gccgccccgccagactctgacacagcaccaaatagcacatcccaacccctgccaacctcc
acacaggctccagcctcctctactgctgctaagcctactgatggcgctactgctgcttct
gctactgccgctgcacctcctgctgctgccgctactgctgctgctgcttcctccacattc
acctccccagcccaagggggcaataccatcacaaactcctcgtcatcttcccccccgcct
ccagcactgggagaaacaaatgcctcaggagcaggcgggtccagcagtagtagcaataca
actgcaactacagatggggccaagcctaggcagcaagtccccaatgctggagcgtcagat
cctctgccacctgggtgggagcaaaggaaagacccgcatgggagaacgtactacgtagac
cacaacaccagaactactacctgggaaagaccacagccactaccaccaggatgggagcgc
agagtggatgaccggggcaggatctattatgtggaccacaacacccgcaccaccacgtgg
cagcgtcccaccatggagtcagtccgcaattttgagcagtggcagagccagcgcagccag
ctgcagggagctatgcaccagtttaaccagagatacctctactctgcatccatgatgtct
gccgagaatgatcctcttggcccgctacctcctggatgggagaggcgtgtggactccaat
gaccgagtgtactttgtcaaccacaacaccaagacaacacagtgggaagacccccgaact
caagggctacagaatgaggacccactgccggaaggttgggagatccgctacacaagggaa
ggggttcgctatttcgtggatcataacacccgaaccaccactttcagcgacccccgcact
ggaaagtcctctgtcaccaaaggccctcagatcgcttatgagcgaagcttccgatggaag
cttgcacatttccgctatttgtgccagtccaatgctctccctagccatgtgaagatcacc
gtctccagacagacgttgtttgaagactctttccagcaaataatggccctgaagccttat
gacttgaggaggagactctatgtcatcttcagaggggaggagggtctagactacggtggt
ttagccagggagtggttcttcttgttgtcccatgaggttctgaaccccatgtactgcctg
tttgagtacgccggcaagagcaactactgtctgcagatcaacccggcctcggccatcaac
ccagaccacctctcctacttctgcttcataggccgctttattgcaatggcacttttccac
ggcaagttcattgacacaggcttctccctgcctttctacaaacgcatgctgaacaagaag
ctaatcctcaaagacctggagtccatcgacccagagttctacaactcactcatatggatc
agggacaacaacattgaggagtgtggcctggagatgtacttctcagtggacatggagatc
ttggggaagatcacttcccatgacctcaaacctgacggcaccaacgtgctagtcactgag
gagaacaaggaggagtatatcagtttaatggcagagtggaggttctcccgcggggtcgaa
ggtcagaccaaagctttcctggatggcttcaatgaagtggttccacttcagtggctccag
tactttgatgaaaaggagctggaggtgatgttatgtggcatgcaggaggttgacctgcag
gactggcagaggaacacagtgtatcggcactacaccaggaacagcaaacagatcatctgg
ttctggcagttggtgaaagaagttgacaacgaagtgcgtctgcggctcatgcagtttgtg
actggaacctgcagacttcctctgggcggctttgctgagctcatggggagtaacgggcct
cagaagttctgcattgagaaagtggggaaggatacatggcttcctagaagccacacatgt
tttaaccgcctggatctgcctccttacaaaagcttcgaccagctgaaagagaagcttctt
ttcgccatcgaggaaacagaaggattcggccaagaatag
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