KEGG   Scomber scombrus (Atlantic mackerel): 134001964
Entry
134001964         CDS       T10651                                 
Symbol
eloca
Name
(RefSeq) elongin C paralog a
  KO
K03872  elongin-C
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134001964 (eloca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssco04121]
    134001964 (eloca)
   03400 DNA repair and recombination proteins [BR:ssco03400]
    134001964 (eloca)
Ubiquitin system [BR:ssco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     134001964 (eloca)
   Cul5 complex
     134001964 (eloca)
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     134001964 (eloca)
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 134001964
NCBI-ProteinID: XP_062297156
LinkDB
Position
20:12669992..12673015
AA seq 112 aa
MDGEERTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atggatggtgaagagagaacctatggtggctgcgaagggccagatgccatgtatgtgaaa
ttgatttcatcagatggccatgaattcattgtgaaaagagaacatgccttgacgtctggg
actatcaaagccatgctgagtgggccaggacagttcgcagagaatgaaaccaatgaagtg
aactttagggagattccatctcacgtcctgtccaaggtctgcatgtacttcacctacaag
gtccgttacaccaacagttccacagaaatacctgaatttcccatagccccggagatcgca
ctggaactgctcatggctgcaaactttttggattgctaa

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