Scomber scombrus (Atlantic mackerel): 134002021
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Entry
134002021 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134002021
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GFIT
Other DBs
NCBI-GeneID:
134002021
NCBI-ProteinID:
XP_062297250
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Position
20:complement(25041937..25060445)
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AA seq
1145 aa
AA seq
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MDQSEDREEGVPPSKSSLCGEHDSQTKAQRRTRRQHRPDSAGPGPGPGPGPGPGPGPGPG
PSCVSMKSDWSKDEIINFKEQHLDATRRKLDQPEPSCVSMNSDWSMGHPYTFKDGRHSDD
HRVEQESSEVPSGQSAQQHQTQLDSIFMLLEENIVTFVKNELKKMQKVLSPDNPECLESQ
SEDEEVLDGEEEEQRRRSRDAFLKITLHFLRRMKQENLAERLQSRTPAGRCRRKLKSNLQ
EKFQCVFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEVRQIESASRKPDRPETTIR
QEDIFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELN
VLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFLNNKNLTDVTE
STSVDVLLTNLIRGKLLPCARLWITTRPAAANQIPPWCVDMVTEVRGFTDPQKEEYFRKR
FRDEEQASTIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSREGGELPKTLTEMYIHY
LVVQAKLKNIKYDGGAETDPHWSPESRKMIGFLGKLAFEQLHKGNLIFYESDLTECGIDI
KVASVYSGVFTQVFKEERGLYQDKVFCFVHLSLQEFLAALHVHLTFIKSGVNLLEEEQTT
SQKSETEQESAETRFYHSAVDEALKSPNGHLDLFLRFLLGLSLQTNQALLRGLLTQTGSS
SKTNQETVEYIKEKIGENVSAERSINLFHCLNELNDHSLVEEIQQSLRSGRLSTDKLSPA
QWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSERSCAALS
SVLSSQPSSLRDLDLSNNNLQDSGVKQLSAGLESPHCELESLSLSGCLITEEGCASLASA
LSSNPSHLRELDLSYNHPGDSGEKILSAGLEDPHWRLDTLSLQPAGVRWLTPGLRKYFCE
LKLDPNTMNRNLKLSDNNRKVTHVYEDQSYPDHPDRFDVCQLLSRNVLTGRCYWEVERRG
NVYISVSYRRISRKGNSDDCWFGFNDQSWSLICSDGRYSVHHNKRQTSISSSSSSSSSSS
SSSSSSSSSNRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLCAGFGFFYSGSSV
SLCGL
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaagctcagagaagaacaaggaggcagcacagaccagactct
gctggacctggacctggacctggacctggacctggacctggacctggacctggacctgga
cccagctgtgtgtctatgaagagtgattggtcaaaggatgaaatcattaattttaaagaa
caacatctggatgcaacaaggaggaagctggaccaacctgaacccagctgtgtgtctatg
aacagtgattggtctatgggtcatccttataccttcaaagatggacgccactctgatgat
cacagagtggaacaggagagctcagaggttcccagtggtcagtctgcccagcagcatcaa
acacagctggactccatatttatgctgctggaggagaacatcgtcacttttgtgaagaac
gagctgaagaagatgcagaaggttctgagtccagataacccagaatgcttagagagtcag
agtgaggacgaggaggtgttggacggtgaggaggaagagcagaggaggagaagcagagat
gcatttctgaagatcacactgcacttcctgaggagaatgaagcaggagaatctggctgag
cgtctgcagagcagaactcctgctggcaggtgtcgacgtaaactcaagtctaacctgcag
gagaagttccagtgtgtgtttgaggggatcgctaaagcaggaaacccaacccttctgaat
cagatctacacaccgctctacatcacagagggagggactgcagaggtcaatgatgaacat
gaggtcagacagattgaatcagcatccaggaaaccagacagaccagaaacaacaatcaga
caagaagacatctttaaagcctcacctggaagagatgaaccaatcagaacagtgatgaca
aagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgggct
gaagacaaagccaaccaggacatacacttcacatttccattcactttcagagagctgaat
gtgctgaaagagaaaaagtacagcttggtggaacttgttcatcacttctttactgaaacc
aaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctg
gatgagtgtcgacttcctctggacttcctcaacaataagaacctgactgatgttacggag
tccacctcagtggatgtgctgctgacaaacctcatcagggggaaactgcttccctgtgct
cgcctctggataaccacacgacctgcagcagccaatcagatccctccttggtgtgtggac
atggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagaga
ttcagagatgaggagcaggccagcaccatcatctcccacatcaagacatcacgaagcctc
cacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtg
ttgaaaagcagagagggaggagagctgcccaagaccctgactgagatgtacatccactac
ctggtggttcaggccaaactgaagaacatcaagtatgatggaggagctgagacagatcca
cactggagtccagagagcaggaagatgattgggtttctgggaaaactggcttttgagcag
ctgcataaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatc
aaagtagcctcagtgtactcaggagtgttcacacaggtctttaaagaggagagagggctg
taccaggacaaggtgttctgcttcgtccatctgagccttcaggagtttctggctgctctt
catgtccatctgacattcatcaagtctggagtcaatctgctggaagaagaacaaacaaca
tcccaaaagtctgaaactgaacaagaatctgcagagacacgtttctaccatagtgctgtg
gacgaggccttaaagagtccaaatggacacctggacttgttcctccgcttcctcctgggt
ctttcactgcagaccaatcaggctctcctacgaggtctgctgacacagacaggaagtagc
tcaaagaccaatcaggaaacagtcgagtacatcaaggagaagatcggtgagaatgtgtct
gcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcattctctagtg
gaggaaatccaacagtccctgagatcaggaagactctccacagataaactgtctcctgct
cagtggtcagctctggtcttcatcttactgtcatcagaaaaagatctggacgtgtttgac
ctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcc
tccaacaaagctctgctgagtggctgtaacctctcagagagaagctgtgcagctctgtcc
tcagttctcagctcccagccctctagtctgagagatctggacctgagtaacaacaacctg
caggattcaggagtgaagcagctttctgctggactggagagtccacactgtgaactggaa
tctctcagcctgtcaggatgtctgatcacagaggaaggctgtgcttctctggcctcagct
ctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagac
tcaggagagaagatcctgtctgctggactggaggatccacactggagactggacactctc
agcctgcagcctgctggagtccgatggttgacaccaggtctgaggaagtatttctgtgaa
ctcaaactggatccaaacacaatgaacagaaacctcaaactgtctgataacaacaggaag
gtgacacatgtgtatgaggatcagtcatatcctgatcatccagacagatttgatgtctgt
cagctgctgagtagaaatgttctgactggtcgatgttactgggaggtcgagaggagagga
aacgtttatatatcagtgagttacagaagaatcagcaggaaaggaaacagtgatgactgt
tggtttggatttaacgatcagtcctggagtctgatctgctctgatggtcgttactctgtc
catcacaataagagacaaacatccatctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctctaacagagtagcagtatatgtggactgtcctgct
ggcactctgtccttctacagagtctcctctgacacactgatccacctccacaccttcaac
accacattcactgaacctctgtgtgctgggtttgggttcttttattctggttcctcagtg
tctctgtgtggtctgtag
DBGET
integrated database retrieval system
