Scomber scombrus (Atlantic mackerel): 134002023
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Entry
134002023 CDS
T10651
Symbol
pld1b
Name
(RefSeq) phospholipase D1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00564
Glycerophospholipid metabolism
ssco00565
Ether lipid metabolism
ssco01100
Metabolic pathways
ssco04144
Endocytosis
ssco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
134002023 (pld1b)
00565 Ether lipid metabolism
134002023 (pld1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134002023 (pld1b)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
134002023 (pld1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134002023 (pld1b)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
134002023 (pld1b)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
134002023 (pld1b)
Endosome - Golgi transport
Others
Others
134002023 (pld1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
DUF3785
Motif
Other DBs
NCBI-GeneID:
134002023
NCBI-ProteinID:
XP_062297254
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All DBs
Position
20:23264261..23288390
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AA seq
827 aa
AA seq
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MEFIDVSQLSFIHDLGPKGLEGMVLKRSGGHRIPGFNCCGRSKMCYRWSKRWLVVKDSFL
LYMKPDSGAISFVMPFDKEFCIKMDSKETETKHGVRIDSLSRSLVLKCTSYRHARWWGQA
IEGFVQKHGSAFLKDHRFGSFAREEENIPAKWYVNGKTYMEDVANALEEAREEIFITDWW
LSPEIFLKRPVVEGNRWRLDCILKRKAQQGVRIFVMLYKEVELALGINSGYSKRTLLHLH
PNIKVMRHPDHVSSAVYLWAHHEKIIVIDQSVGFVGGIDLAYGRWDDKEHRLTDVGSVTL
SQAETSPANMTPPANGSGGVSHGNGKNIFTVTDSVDQPKLKGQGRMKRTRFSIKKHLQKH
GLAHPDSDSDAEPEERSGSVRSLHTGVGELFGNTRFWHGKDYCNFVHKDWIQLDKPFDDF
IDRHTTPRMPWHDIASVVHGKAARDVARHFIQRWNFTKLVKPKYRSLSYPYLLPKSHTTA
GEQRYQVPDCTPAKVQILRSASDWSAGIKYHEESIHNAYVETIKNSQYFIYIENQFFISC
ADNRHVFNKIGDTIAERIIKAYREGKKYRVYVVTPLLPGFEGDINTGGGSAIQAVMHFNY
RTMNRGDQSIISQLRKEMGDQWMNYISIAGLRTHADLEGKLVTELIYVHSKMLIADDNTV
IIGSANINDRSMLGKRDSEVAVIVEDSETVTSVMDGQEYQAGKYALKLRLECFKMILGAN
TDPSIDVSDPISDHFYKEVWMATCAINATIYQRVFRSLPSSDVRNILELEGYLAKLGLEK
EDPARAHEELKKIRGFLVQFPLQFLSEQNLLPPIGSKEAMVPMEVWT
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagttcattgatgtcagtcagttatccttcatccatgacctgggaccaaaaggcttg
gaagggatggtgctgaagcgctccggcggccatcggatccccgggtttaactgctgtggt
cgcagtaagatgtgctaccgctggtccaaacgctggctcgtggtgaaggactcgttcctg
ctgtacatgaagccggactcgggcgctatctcctttgtgatgccgttcgacaaagagttc
tgcatcaagatggactccaaagagactgagaccaaacacggcgtccgcatcgacagtctc
tccaggtcgttagtactgaagtgcaccagctacagacacgcccgctggtggggtcaggcc
atcgagggcttcgtacagaagcacggctcggcgttcctcaaagaccaccgcttcggatcc
ttcgccagagaggaggagaacatccctgccaagtggtatgtgaatggtaaaacatacatg
gaggatgttgccaatgctcttgaagaagccagagaggaaatattcatcacggactggtgg
ttgagtccagagatcttcctgaagaggcctgttgtggagggaaaccgctggcgtctggac
tgcatactgaaacgcaaagctcaacaaggagtgcgtatctttgtgatgctgtataaggag
gtggagttagctctgggcatcaactcaggatacagcaagaggacgctgctccaccttcac
cccaacatcaaggtgatgcgtcacccggaccacgtctcctccgccgtctacctgtgggcg
catcacgagaagatcatcgtcatcgaccaatcggtgggcttcgttggcgggatcgacctg
gcgtacggtcgctgggacgacaaagagcaccggctgacggatgttgggagtgtgacgctc
tcgcaggctgaaacttcccctgccaacatgacccccccggccaacggcagtggcggcgtc
tcccacggcaacgggaagaacattttcacggtgacggactcggttgaccagccgaagctg
aagggtcaggggaggatgaagaggacgaggttcagcatcaagaaacacctgcagaaacac
ggcctggctcatcccgacagcgacagcgacgccgagcccgaagagaggagtggttcagtg
cggagtctgcacacaggtgtgggagagctgtttggaaacacgcggttctggcacggaaag
gactactgcaactttgtgcacaaagactggatccaactggacaaaccgttcgatgacttt
atagacaggcacaccactcctcggatgccttggcacgacattgcttcggtggttcacgga
aaggctgctcgggacgtggcgagacacttcatccagcggtggaacttcacaaagctcgtg
aagccaaagtatcgctctctgtcgtacccgtatctgctgcccaagtctcacaccaccgcc
ggagagcagcgataccaagtccccgactgcacccccgccaaagtccagatccttcgttca
gcttctgattggtctgctggcattaaataccacgaggagtccatccacaacgcctacgtc
gagaccatcaaaaacagccaatacttcatctacatagagaatcagttcttcatcagctgt
gcagacaacaggcatgttttcaacaagataggagacacgattgccgagcgcatcatcaaa
gcatatagggagggtaaaaagtaccgtgtgtacgtggtgacgcctctgttgcctggcttc
gagggcgacatcaacaccggagggggcagcgccatccaggctgtcatgcactttaactac
aggaccatgaacagaggggaccagtccatcatctcacagctcaggaaagagatgggagat
cagtggatgaactacatctccatcgctggtctgaggactcacgctgacctggaggggaag
ctggtcaccgagctcatctacgtccacagcaagatgctcatcgccgacgacaacaccgtc
atcatcggttctgctaacatcaacgaccgcagcatgctgggaaagagggacagcgaggtg
gcggtgatcgtggaggactcggagacggtgacgtcggtgatggacggacaggagtaccaa
gctggaaaatacgctctgaagctccgactcgagtgcttcaagatgattctgggtgcaaac
actgatccctccatcgacgtgtccgaccccatcagtgaccatttctacaaggaggtctgg
atggccacctgcgctattaacgccaccatctaccagagggttttccgctctctgccgtcg
agcgacgtccgaaacatcctggagctggaaggctacctggccaagctgggcctggaaaaa
gaggatccggcccgcgctcacgaggagctgaagaagatccgcggcttcctcgtccagttt
cctctgcagttcctgagcgagcagaacctgcttcctcccatcggctccaaggaggccatg
gtgccgatggaggtctggacctga
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