Scomber scombrus (Atlantic mackerel): 134002082
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Entry
134002082 CDS
T10651
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134002082 (zeb1b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
134002082 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
zf-H2C2_5
Homeodomain
zf-met
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
134002082
NCBI-ProteinID:
XP_062297338
LinkDB
All DBs
Position
20:complement(5098762..5147092)
Genome browser
AA seq
1136 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVVEAGSESDDEDKLHIVEEEGSLADGADCDSTLP
DEEHPRERCWDRVKEDCASDGEDDSTDALVEEMLQQGDTAVIYPEAPEDEPQRHGTPDAS
IHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEECFSCPECSYTFAHRSQL
ERHMTAHKPGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISLISVNGKPRLANSKTQTQGPTPILPTSPSVLRTQIREKLEH
SKPLQEQLPLNQIKSEPVDYEYKPTLMTSAAVAGMNGGVFNGAAAPLHGTVQAVVLPTVG
LVSPISINLADLQNALKVAVDGNVIRQVLESNAKGQGQMNSGLTTGTLHPTQQQLISAIS
LPIVGQDGNAKIIINYSLDPNQGQLTAQNLKKEPEPISAAQLNEAYKSQKLPEDLTIRGT
RPTETKEEEMTTKTCLLCDNCPGGLEALHALKHCKKDGLKLNGAGLDKSESAVAALLSEG
GLCNQPKNLLSLLKAYFALNAEPTKDELAKISDSVSLPIHVVKKWFDKMQEGQISLGAPT
PPSEEEDTCDANSVVSLVPGKDKATMGPSVTQNSPTEATPAEVNGSHSSPASPSPLNLTA
DGPVPAQPPQSTEGPLDLSLPKSDREEAERVLTKACVYPSLSSGSTNQDEPLNLTCTKKE
ASPLSAMGSRHIAMYASQPSANPLNILTTQLPTLVTIGEQGHMQCLRALTTNNKQTILIP
QLAYTYTTTANSPAGTETHETIHLNGIKEEKLDTGSEGVSTLEEHNDSDSGPARKKMKKT
DNGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKKETQSQGEGRESPEVDGEAQAELEALSQTLPL
RLAPSQLDSDERGSSTREDEESEEYEEEEEEAAIDMDDIQVVQIGDEGGDEEEEEEERNE
EEMETVAAEKTEIEEEEEADTRQEAEEEEEEVHGGDKEEEGEGEEEEEGVHGGDKEEEGE
EEEVKVEGEEAMATEEGLTEEGRAEEEVTEESGGETNRNTVSEDEKQTQQEKGDTD
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
accaactacaacaatgtggtggtggaggccggctcggagtcagatgacgaggacaagctg
cacatcgtggaggaggaaggcagcctggcggacggggccgactgcgacagcaccctacca
gacgaggagcaccccagggagcgttgctgggaccgagtgaaggaggactgtgcgtcggac
ggtgaggatgacagcacagacgctttggtggaggagatgctccagcaaggagacacggcc
gtcatctacccagaggccccggaggacgaaccccaacgccacggcacccccgacgccagc
atccatgacgagaacggaaccccagactccttctctcagctgctcacctgtccgtactgc
gcgcgcggctacaagcgctacagctccctgaaggagcacatcaagtatcggcacgagaag
acagaggaatgcttcagctgccccgagtgcagctacacctttgcacaccgctctcaactg
gagagacacatgacagcccacaaacccggacgggatcagagacacatcacacagtcggga
ggcaatcgcaaattcaagtgcactgaatgtggcaaagcatttaaatacaagcaccatctg
aaggagcacctacgcatccacagcggagagaaaccctacgagtgctccaactgcaagaaa
cggttctcccactcgggctcgtacagctcccacatcagcagtaagaagtgcatcagcctc
atctcagtcaacggcaaaccacgcttggccaacagcaaaacccagacccagggtccaaca
ccaatcctccccacgtcaccctctgtcctccgcacccagatcagggagaagctggagcac
agcaagcccctacaggagcagctgcccctcaatcagatcaagagcgagcccgtggactac
gagtacaagccgacactgatgacgtctgcggctgtggctggcatgaacggcggggttttc
aacggcgctgcagctcccctgcatggcacagtgcaggctgtggtcctgcccactgtgggt
ctggtgtcgccaatcagcatcaacctagcagacctgcagaacgctctcaaagtggcggtg
gacggtaacgtcattcgccaggtgctggaaagcaacgccaaaggccaggggcagatgaac
tctgggttaaccactggaacgctccacccaacgcagcagcaactcatctcagccatcagt
ctgcctattgtgggtcaggatggaaatgcaaaaatcattataaactacagcttggacccc
aaccagggccagctcacagcccaaaacctgaagaaagagcctgagcccatctcagcagct
cagctcaatgaggcctacaagtctcagaaactcccagaagatcttaccatcaggggcacc
aggcccactgagactaaagaagaggaaatgaccactaaaacttgtctcctgtgtgataac
tgtcccggtgggctggaagcactccatgccctcaagcactgcaagaaggatggtctcaag
ctgaacggagcaggcctggataagtctgagtctgctgttgctgccctgctgtcagaggga
ggactttgcaaccagcccaagaacctcttgtccctgctcaaggcttactttgccttgaac
gctgagcccactaaggatgagctggccaagatctcagactctgtcagcctgccaatccat
gtggtcaagaagtggtttgacaaaatgcaggaaggtcagatatcactaggtgccccaaca
cctccttcagaggaagaggacacctgtgatgctaacagtgtggtgtctctggtcccaggg
aaggacaaggccactatgggtccttctgtgacccagaacagccccacagaagcaaccccg
gccgaggtcaacggctcccacagctcccctgcctccccctcgccactaaacctgacagct
gacggtcccgtcccagcccagcccccccagagcactgagggacccctagacttgtcgctg
ccaaagtccgacagagaggaagcagagagagtgttgactaaagcctgtgtttacccctcc
ctttcctctggctctaccaatcaggatgaacctctgaatctaacttgcacaaagaaagag
gcatcgccactctcagccatgggcagccgccatattgcaatgtacgccagccagccaagt
gccaaccccctcaacatattgaccactcagctccccactctggtgactatcggcgaacag
ggccacatgcaatgcctaagggccctaaccaccaacaacaaacagactatcctgatccct
cagctggcttacacttataccactacagctaacagccctgctgggacagagacacatgaa
accatccacctcaacggcataaaggaggagaagcttgacacaggctcagaaggcgtgtcc
actttagaggagcacaacgactccgactcgggccccgcgaggaagaagatgaagaagacg
gacaacggcatgtacgcctgcgacctgtgcgacaagatcttccagaagagcagctcgctg
ctcagacacaaatacgaacacacagggaagagacctcacgagtgcggcatctgcaccaag
gccttcaaacacaaacaccacttgatcgaacacatgcgactccactcgggggagaagccg
taccagtgcgacaagtgcggcaagcgcttctcccattcgggctcctactcccagcacatg
aaccaccgctactcctactgcaagaaggagacgcagagccaaggagagggcagggagagt
cccgaggtggacggcgaggcccaggccgagctggaggccttgagccagacgctgcctctg
cgcctggctccgtcccagctggactcggacgagcgagggagcagcaccagagaggacgag
gagagcgaggagtacgaggaggaggaggaagaggccgcaattgacatggatgacatccag
gtggtgcagataggagatgaaggaggggatgaggaggaggaggaagaagagaggaatgag
gaggagatggagactgtagcggcggagaagacagagatagaggaggaagaggaggctgac
acaaggcaggaggcggaggaggaggaggaggaggtgcacgggggtgataaagaggaggag
ggggagggggaggaggaggaggagggggtgcacgggggtgataaagaggaagagggggag
gaggaggaagtcaaggtggaaggtgaagaggcgatggctacagaagaagggttgacagaa
gagggaagagcagaggaggaggtcacggaggagagcggaggcgaaacaaacaggaacacg
gtctctgaagacgagaagcagacgcagcaggagaaaggagatactgactaa
DBGET
integrated database retrieval system
