Scomber scombrus (Atlantic mackerel): 134002169
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Entry
134002169 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134002169
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GFIT
Other DBs
NCBI-GeneID:
134002169
NCBI-ProteinID:
XP_062297438
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Position
20:complement(25041390..25079195)
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AA seq
1130 aa
AA seq
DB search
MDQSEDREEGVPPSKSSRCEEHDSQTKMDRPDSAGPAPGPGPGPGPSCVSMKSDQSKDEL
IHFKEQRPAATRRKLDQPEPSCVSMNSDWSMDRPNTFKDGRHSDDHRVDQESSGVPSGQS
AQQHQTQLDSIFMLLEENIVTFVKNELKKMQKVLSSDFPECLESQSEDEEVLNCEEKEQR
RRSRDAFLKITLHFLRRMKQEDLAERLQSRTPAGRCRRKLKTNLQKKFQCLFEGIAKAGN
PTLLNQIYTPLYITEGGTAEVNDEHEIRQIETASRKPDRPETTIRQEDIFKASTGRDEPI
RTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHH
FFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFLNNKNLTDVTESTSVDVLLTNLIRGK
LLPCARLWITTRPAAANQIPPWCVDMVTEVRGFTDSQKEEYFRKRFRDEEQASTIISHIK
TSRSLHIMCHIPVFCWITATVLEDVLKSRKRGKLPKTLTEMYIHYLVVQAKLKNIKYDGG
AETDPHWSPESRKMIGFLGKLAFEQLHKGNLIFYESDLTECGIDIKVASVCSGVFTQVFK
EERGLYQDKVFCFVHLSLQEFLAALHVHLTFIKSGVNLLEEEQTTSQKSETEQESAETRF
YHSAVDEALKSPNGHLDLFLRFLLGLSLQTNQALLRGLLTQTGSSSKTNQETVEYIKEKI
GENVSAERSINLFHCLNELNDHSLVEEIQQSLRSGRLSTDKLSPAQWSALVFILLSSEKD
LDVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSERSCAALSSVLSSQPSSLRDLDL
SNNNLQDSGVKQLSAGLESPHCELESLSLSGCLITEEGCASLASALRSNPSHLKELDLSY
NHPRDSGEKLLSAGLEDPHWRLDTLSLQPAGVRWLTPGLRKYFYELKLDPNTMNRNLKLS
DNNRKVTRVKEDQSYPDHPDRFDYWDQLLSRNVLTGRCYWEVERRGNVHISVSYRRISRK
GNSADCWFGYNDQSWSLFCSDGRYSVLHNKRQTSISSSSSSSSSSSSSSSSSSSSNRVAV
YVDCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLCAGFRFWSGSSVSLCGL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagtgaggacagagaggagggagtccctccctctaaaagctctcggtgtgag
gaacatgacagccagaccaaaatggatagaccagactctgctggacctgcacctggacct
ggacctggacctggacccagctgtgtgtctatgaagagtgatcagtcaaaggatgaactc
attcattttaaagaacaacgtccggctgcaacaaggaggaagctggaccaacctgaaccc
agctgtgtgtctatgaacagtgattggtctatggatcgtcctaataccttcaaagatgga
cgccactctgatgatcacagagtggaccaggagagctcaggggttcccagtggtcagtct
gcccagcagcatcaaacacagctggactccatatttatgctgctggaggagaacatcgtc
acttttgtgaagaacgagctgaagaagatgcagaaggttctgagttcagatttcccagaa
tgcttagagagtcagagtgaggatgaggaggtgttgaactgtgaggagaaagagcagagg
aggagaagcagagacgcatttctgaagatcacactgcacttcctgaggagaatgaagcag
gaggatctggctgagcgtctgcagagcagaactcctgctggcaggtgtcgacgtaaactc
aagactaacctgcagaagaagttccagtgtctgtttgaggggatcgctaaagcaggaaac
ccaacccttctgaatcagatctacacaccgctctacatcacagagggagggactgcagag
gtcaatgatgaacatgagatcagacagattgaaacagcatccaggaaaccagacagacca
gaaacaacaatcagacaagaagacatctttaaagcctcaactggaagagatgaaccaatc
agaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttc
actctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattcact
ttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatcac
ttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttc
atctttgacggtctggatgagtgtcgacttcctctggacttcctcaacaataagaacctg
actgatgttacggagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaa
ctgcttccctgtgctcgcctctggataaccacacgacctgcagcagccaatcagatccct
ccttggtgtgtggacatggtgacagaggtcagagggttcactgactcacagaaggaggag
tacttcaggaagagattcagagatgaggagcaggccagcaccatcatctcccacatcaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctaca
gttctggaggatgtgttgaaaagcagaaagagaggaaagctgcccaagaccctgactgag
atgtacatccactacctggtggttcaggccaaactgaagaacatcaagtatgatggagga
gctgagacagatccacactggagtccagagagcaggaagatgattgggtttctgggaaaa
ctggcttttgagcagctgcataaaggcaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcaaagtagcctcagtgtgctcaggagtgttcacacaggtctttaaa
gaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctgagccttcaggag
tttctggctgctcttcatgtccatctgacattcatcaagtctggagtcaatctgctggaa
gaagaacaaacaacatcccaaaagtctgaaactgaacaagaatctgcagagacacgtttc
taccatagtgctgtggacgaggccttaaagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggtctttcactgcagaccaatcaggctctcctacgaggtctgctgaca
cagacaggaagtagctcaaagaccaatcaggaaacagtcgagtacatcaaggagaagatc
ggtgagaatgtgtctgcagagagaagtatcaatctgttccactgtctgaatgaactgaat
gatcattctctagtggaggaaatccaacagtccctgagatcaggaagactctccacagat
aaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaagat
ctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttttgaggctgctg
ccagtggtcaaagcctccaacaaagctctgctgagtggctgtaacctctcagagagaagc
tgtgcagctctgtcctcagttctcagctcccagccctctagtctgagagatctggacctg
agtaacaacaacctgcaggattcaggagtgaagcagctttctgctggactggagagtcca
cactgtgaactagaatctctcagcctgtcaggatgtctgatcacagaggaaggctgtgct
tctctggcctcagctctgcgctccaacccctcccatctgaaagagctggaccttagctac
aatcatccacgagactcaggagagaagcttctgtctgctggactggaggatccacactgg
agactggacactctcagcctgcagcctgctggagtccgatggttgacaccaggtctgagg
aagtatttctatgaactcaaactggatccaaacacaatgaacagaaacctcaaactgtct
gataacaacaggaaggtgacacgtgtgaaggaggatcagtcatatcctgatcatccagac
agatttgattactgggatcagctgctgagtagaaatgttctgactggtcgatgttactgg
gaggtcgagaggagaggaaacgttcatatatcagtgagttacagaagaatcagcaggaaa
ggaaacagtgctgactgttggtttggatataacgatcagtcctggagtctgttctgctct
gatggtcgttactctgtccttcacaataagagacaaacatccatctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctcctcctcctcctcctctaacagagtagcagtg
tatgtggactgtcctgctggcactctgtccttctacagagtctcctctgacacactgatc
cacctccacaccttcaacaccacattcactgaacctctgtgtgctgggtttaggttctgg
tctggttcctcagtgtctctgtgtggtctgtag
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