Scomber scombrus (Atlantic mackerel): 134002206
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Entry
134002206 CDS
T10651
Symbol
tars3
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134002206 (tars3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssco01007
]
134002206 (tars3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
134002206 (tars3)
Enzymes [BR:
ssco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
134002206 (tars3)
Amino acid related enzymes [BR:
ssco01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
134002206 (tars3)
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
134002206 (tars3)
Prokaryotic type
134002206 (tars3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
HGTP_anticodon2
Motif
Other DBs
NCBI-GeneID:
134002206
NCBI-ProteinID:
XP_062297526
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All DBs
Position
1:9010037..9020458
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AA seq
820 aa
AA seq
DB search
MAECLAARLAAQEEQIRLLAGEISSLRDGLSRGSLDACGAAAVITPELETLRTENDKLKY
RLLHLRRGLQAELQLEEEAKKAKGGRQNGVKCGRAPEVNTSKQQQTNNRVDKKVTAPATK
PGDKNKNKDKKQEKGQGAGGVKELKPLPGYIPERLSLYEELKKENDALLAKRATNSKPIT
VELPDGSKVAGKAWFTTPYQLACNISQGLADNAVISRVNRELWDLDRPLEQDCSLEILRF
DNEDAQAVYWHSSAHILGEAMECFYGGCLCYGPPIENGFYYDMFLDGQKGVSSTEFGDLE
TLCKNVVKEKQPFERLEVSKETLLKMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLCRG
PHVRHTGKIKAMKIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLKEWERFQEEAKNRDH
RKIGKDQELFFFHDLSPGSCFFMPRGAYIYNTLTEFIRDEYWRRGFQEVASPNIYNSKLW
ETSGHWQHYSENMFSFPVEDDIFALKPMNCPGHCLMFSHRPRSWRELPLRLADFGVLHRN
ELSGTLTGLTRVRRFQQDDAHIFCTMDQIETEMKGCLDFLRCVYDVFGFSFQLHLSTRPE
KYLGDIAVWNQAEKQLENSLNEFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATIQL
DFQLPIRFNLTFVGKDGDDKARPVIIHRAILGSVERMIAILTENYAGKWPLWLSPCQVML
VPVNPSCEEYAKRVCKQFTEAGIMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKEKMT
NGVNVRTRDNKVHGELSVAEVLARLTLLKQSRCKNAEEEF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtgcctggctgcacgtttggcagctcaggaggagcaaatccgacttctcgcc
ggggagatctcctctcttcgagatggactaagccgaggtagtctggacgcctgcggtgct
gctgcagtgatcaccccggagctggagaccctgaggacggagaatgacaagctcaagtac
cgcctgcttcacctccgccgtggtctccaggcggagttgcagctggaggaggaggctaag
aaggcgaagggcgggagacagaatggagtcaagtgtggcagagctccggaggttaacacc
agcaaacaacagcagacgaacaaccgagtggataaaaaggtgacagctcctgctactaaa
ccaggtgacaagaacaagaacaaggataagaagcaggagaagggacaaggagctggtggt
gtgaaagagctgaagcctttgcctggatacatcccagagcgcctcagcctctacgaagag
ctgaagaaggagaatgacgccctcctggccaaaagagctacaaacagcaagcccattact
gtggagctgccagacggaagtaaggtggcaggcaaggcttggttcaccacaccctaccaa
ctggcctgcaacatcagccaaggcctggctgacaatgcagtgatttctcgagtcaatagg
gagctgtgggacttggacagacctctcgagcaggactgctctcttgagatcttgcgcttt
gacaatgaggacgcccaggctgtgtactggcactccagtgctcacatcttaggggaagca
atggagtgcttttatggaggctgtttatgttatggaccccccatagagaatggcttctac
tacgacatgttcctggatggacaaaagggagtatccagcactgagttcggggacctggag
actttgtgtaagaatgtggtgaaagaaaaacagccctttgagaggctggaggtcagcaag
gagacactgctgaagatgttcaagtacaacaaattcaagtgccgcattctgaatgaaaaa
gtcaccacccccactactacagtctacagatgcgggcccttgattgacctgtgcagaggt
ccccatgtaagacacactggcaagatcaaagccatgaagatctataagaactcttccacc
tactgggagggccgctcggacatggaaacactacagaggatctacgggatttccttccct
gactcaaagatgctgaaagagtgggaacgtttccaggaggaggccaagaatagagaccat
cgcaaaattggcaaagaccaggagctgttcttcttccacgatctgagccccggcagttgt
ttcttcatgccgcggggagcctacatctacaacacactcaccgagttcatcagggatgag
tactggagaagaggttttcaggaagtggcctctcccaacatctataacagcaaactgtgg
gagacatctggccactggcaacactacagcgaaaacatgttttctttccctgtggaggat
gatatctttgcactgaagcccatgaactgccccggacactgtttgatgttcagccaccgg
cctcgctcatggagggagcttcccctgcggttggcggatttcggggtcctccacaggaat
gagctgtcaggaacgctgaccgggctgaccagagtgcgccgtttccagcaggatgacgct
cacattttctgcacgatggatcagatcgagacagaaatgaagggctgtcttgacttcctc
cgctgtgtttacgatgtgttcggcttctccttccagctccacctctccactcgtccagag
aagtacctgggtgacatcgctgtgtggaaccaggcggagaagcaattggagaacagcctg
aatgagtttggggagccatggaaactcaaccctggagacggtgctttttacggacctaag
atcgacatcaagatcaaagatgcaattggacgttaccaccagtgtgcaaccattcagctg
gacttccagctgccgatccgcttcaacctgacctttgtggggaaggatggggatgacaaa
gcccggccagtaatcatccatcgtgccatcttgggctcagttgagaggatgattgccatt
ctcacagagaactacgcaggaaaatggcctctgtggctctctccatgtcaggtgatgtta
gtgcctgtcaatccctcctgtgaggaatatgccaagagggtttgtaagcagtttaccgaa
gctggtatcatggcagatgctgacctggactctagctgtcttctaaacaaaaaaatccgc
aacgctcagttggcccaatacaacttcattctcgttgtcggagaaaaggagaagatgacc
aacggcgtcaatgtgcgcacgagggacaacaaggtccacggagaactgtcggtggccgag
gtgctggctcgcctgaccctgctcaaacagtcccgctgcaagaacgcagaggaggagttc
tga
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