Scomber scombrus (Atlantic mackerel): 134002239
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Entry
134002239 CDS
T10651
Symbol
nrros
Name
(RefSeq) transforming growth factor beta activator LRRC33
KO
K26317
transforming growth factor beta activator LRRC33
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134002239 (nrros)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_LRWD1
LRRNT
DUF3557
LRR_NXF1-5
FNIP
Motif
Other DBs
NCBI-GeneID:
134002239
NCBI-ProteinID:
XP_062297527
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Position
20:complement(8458621..8463772)
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AA seq
682 aa
AA seq
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MPVHRLTPILFCLLHMWRILSSHPQHSPCQMKQRTVLCNNGKLSSVPAGLPDNIEELQLN
YNHIQTLQDNSLLQYPSLNTLSLACNSMQKLEANTFKDSKLLEGLNLANNDLDIGYQETS
CALKKLAGLRYLDLSENKLDDEMAATLLQNLTSLEYLNLSGNMLRRLDETSFSDLHQLKE
LDLQRNTLFEIDSAFDGNPKLQRLSLAFNYLTCLTDFHMTQLVVLNASHNFIEWFISRQD
LNDTFQLETLDLSDNKLLFFPFLPSQSHLRNLYLSHNRVSFYEHLSDNDTSPDSPKTVEF
YNLKRNNNNVTAQLWNDSLHGDISSLEILDLSGNLVQYFPQGFIHKMPVLSRLRMYTNCL
ETLNLTLEHFSGSLYELDISNNRLNQIVADEGTLTTFGNLTYLNLSLNDLDWLSSGLFSS
LPSLRSVDLSYNNIDICLPVEAETSTDNISACVDWRNIVSLRQLYLKGCNLKRIPPSSFT
GLSLTHLELSDNSGLTVQQSLQSLSKMLQHLGLGNTQIQDFDFSNFQSLKSLNISGNFLT
QLPPSLLSLDLKLLDLRDNRLSTIPSGQAITLAPKLQTLFLTGNPFNCCETEWFRTFETT
KTINMVGQSYIECEDLFTTHRVSDSQSFECDEEDVESLLWYIILFVSVCLPFVGISIVVL
LTVKPQIVKKSIKKKCLKPTSY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgccagtccacaggctcactccaatcctgttttgcttactacacatgtggagaatcctc
tcaagtcatccacaacacagcccatgccagatgaaacaaagaacggtgctgtgcaacaat
ggcaaactctcgtctgtaccagcaggactgccagacaacatcgaggagcttcagctcaac
tacaatcacattcaaacactacaggacaattctcttctccaatacccctcactaaacacc
ctgagtctagcctgtaacagtatgcagaaattagaagccaacacttttaaagactcaaaa
ttgttagaaggcctaaatttagcaaataatgatcttgatattggctaccaagaaactagc
tgtgcgttaaagaagctagctgggcttagatatttagatctctctgaaaataaacttgat
gatgaaatggctgccactcttctccaaaatctaacatccctggaatacctcaatctctct
ggcaacatgttacggaggctggatgagacctcgttcagtgatctccaccagctcaaagaa
ctcgacctgcagaggaacaccctgtttgagattgatagtgccttcgacggcaatcccaag
ctccagcggctcagcttggctttcaactatctgacttgcctaactgacttccacatgaca
cagttggtggttctcaatgccagccacaacttcattgaatggttcatctctcgacaagac
ctcaatgacactttccagctagagacgcttgacctgtcagataacaaactactcttcttc
cctttcttgcccagccaaagtcacctgcggaacctttacctatcccacaaccgtgtgagt
ttttacgaacacctgtcagacaatgacacatccccggactcgcccaagactgttgagttc
tacaacctgaagaggaataataacaatgtgacggctcagttatggaacgacagtcttcac
ggtgacatctcctctctagagattttagacctaagtggaaacctggtgcagtatttccct
caaggattcatccacaaaatgcctgtcctgtccagacttcgaatgtacacaaactgtcta
gaaaccttgaatctaactttagagcatttctctggcagcttgtatgagttagatatcagc
aacaacaggctgaaccagatagtagcagatgaaggtacactgaccacttttggcaatctg
acctaccttaaccttagcctgaatgatcttgactggctatcgtctggattattttcctca
ttgccaagcctcagatcagtggatctcagttacaacaacattgacatctgccttcctgtg
gaagctgagacgagtacagacaatatctcagcttgtgtggattggagaaacattgtatct
ctaaggcagctttaccttaagggatgcaaccttaaaaggattccaccatcttcgttcact
gggttgtcgctcacacacttggaattgtctgataactctggcctcactgtccaacaatcg
ttacaaagtcttagcaaaatgttacagcatttaggtttaggaaacacacaaatacaggac
ttcgacttctcgaatttccaaagtctgaagtcattaaacatttcagggaactttctgacc
cagcttcccccttccctccttagtctcgacctaaaactgctcgacttgagggacaacaga
ctgtccacaattccctcaggtcaggctataacattagccccgaaacttcagactcttttc
ctcacaggaaatccattcaactgctgcgaaactgaatggttcaggacatttgaaacaaca
aagacaatcaatatggttggacagtcatacattgaatgtgaagatctcttcacaacacac
agagtgagtgattcccagtcatttgaatgtgatgaggaggatgtggaatcactgctctgg
tatattatccttttcgtgtctgtctgtcttccttttgtgggcatttcaattgttgttctc
ctcactgttaagccccaaatagtaaaaaaatcaatcaaaaagaaatgtttgaagcctaca
tcgtactga
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