Scomber scombrus (Atlantic mackerel): 134002242
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Entry
134002242 CDS
T10651
Name
(RefSeq) glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134002242
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssco01007
]
134002242
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
134002242
03029 Mitochondrial biogenesis [BR:
ssco03029
]
134002242
Enzymes [BR:
ssco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
134002242
Amino acid related enzymes [BR:
ssco01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
134002242
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
134002242
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
134002242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
OS-D
Motif
Other DBs
NCBI-GeneID:
134002242
NCBI-ProteinID:
XP_062297531
LinkDB
All DBs
Position
20:complement(14547672..14556509)
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AA seq
750 aa
AA seq
DB search
MLLRSAASALLRTSTDISSLCPVSTVRFFRQSLRYQPRHRPLSTSVCLCKKNQKKSLWLQ
PTEGRTMDGNIEQILAPLRLAVKEQGDLVRQMKQDGVPDVDVTKAVAELKARKRTLEAKE
LSLQPKDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHF
IQEEQILEIDCTMLTPESVLKTSGHVEKFADYMVKDVKNGECFRADHLLKAHLQKLMSDK
KCTAEKKAEMEEVNTQMDNFTQQELTDLFVKYNVKSPTTGNDLTAPISFNLMFQTSIGPG
GNMTGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMA
EIEHFVDPNEKVHPKFSSVADLDIMLYSSKAQTSGQSAHIMKLGDAVEQGVVNNSVLGYF
IGRIYLYLTKVGIAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCFDL
KCHARVTKVPLVAEKPLKEPKVVNVVQFEPNKGAIGKAYKKEAKIVMEYLSVCDECYITE
QEQLLNETGEFTVETEGKTFKLTKDMVNVKRFQKTLHVEEVVPNVIEPSFGIGRIMHTIF
EHTFHVREGDEQRTYFSFPATVAPYKCSVLPLSQNQEFVPFVRELSEAMTKNGVSHKVDD
SSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPVIVRDL
ANGTMTWAEVESKYPIFEGQETSKKDTTEE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcgcagcgcagcatcggcactgctgaggaccagcactgacatttcctccctc
tgcccggtgtccacggtccggttttttcggcagtcgctccgctaccagccccgacacagg
ccgctttcaacgtcggtctgcttgtgtaagaagaaccagaagaaaagtctttggctgcag
ccgacggaaggacgaaccatggacggcaacattgagcagattctcgcccctttgaggctt
gcagtcaaagaacagggggacctggtgcgccaaatgaagcaggatggcgttcctgatgtg
gatgtcacaaaggctgtggctgaactgaaagcaaggaagagaactctggaggccaaggag
ctgtcactacaacccaaagatgacattgttgacagaactaagatggaggataccctgaag
aggcgattcttctatgaccaggcctttgccatctacggaggggtgagcggcctgtatgac
ttcggccccgtgggctgtgccctgaagaacaacatcctgcaggcctggaggcagcacttc
attcaggaggagcagatcctggagatcgactgcaccatgctgacccccgagtctgtcctc
aagacgtcaggacatgttgaaaaatttgctgactacatggtgaaagacgtcaagaatggt
gaatgcttcagggcggaccacctccttaaagcccatctccagaagttgatgtctgataaa
aagtgtacagcagagaagaaggcagagatggaggaggtcaacactcagatggataatttc
acccagcaagagctgaccgatctctttgtgaaatacaacgttaagtcacccaccacagga
aatgacctcacagcacccatctctttcaacctgatgtttcagacgtccattggaccaggg
gggaatatgacaggctatctgaggcctgaaaccgctcagggaatcttcctcaactttaag
cgtctattggagttcaaccagggaaaacttccctttgctgctgctcagataggaaactcc
ttcaggaatgaaatctctcctcgctctggactcattcgcgttagagagttcaccatggct
gagattgagcactttgtggacccgaatgaaaaggtccaccctaaattctccagtgtagcc
gacctggatatcatgttatactcctctaaagcccagaccagtggccagtctgcacatatc
atgaagctgggagatgctgttgagcagggagtggtcaataactccgtcctgggatatttc
attgggaggatctacctctaccttactaaagttggtatagccaaagacaagctgcgcttc
cgtcagcatatggacaacgagatggcccactacgcctgtgactgctgggatgctgaaacc
aaaacttcctatggctggattgagattgtggggtgtgctgaccggtcctgctttgatctg
aaatgccacgcacgagtcacaaaggtccctctggtagctgagaagcctctaaaagaaccc
aaagttgtaaatgtcgtccagtttgagcctaacaaaggagccattgggaaggcgtataag
aaggaggctaagatagtcatggagtatctgtctgtgtgtgatgaatgttacattacagaa
caggagcagctgcttaatgagactggagaattcaccgtcgagacagaaggaaagacgttc
aaactcacaaaggacatggtcaatgtgaagcgattccagaagactctgcatgtggaggaa
gttgttccgaacgtaatcgagccctcctttggcattggtaggatcatgcacacgatcttt
gagcacacattccatgtcagagaaggtgatgaacagagaacgtactttagcttccctgca
actgtagctccatacaaatgctccgtcctgcctctgagtcaaaaccaggaattcgtgccc
ttcgtgagggaattatctgaggcaatgaccaaaaacggtgtctctcacaaggtggacgac
tcctcaggatccatcgggaggcgctacgccaggacagatgagatcggagtggcctttggc
atcaccattgacttcgacacagtgaacaagacgcctcacacggccactctgagagaccgt
gactcaatgaggcagatcagggctgaggtcagtgagctgcctgttattgttcgggatttg
gccaacggcacaatgacctgggcggaagtggagagcaagtaccccatctttgaaggacag
gagactagcaagaaggacacaaccgaagagtaa
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