Scomber scombrus (Atlantic mackerel): 134002243
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Entry
134002243 CDS
T10651
Name
(RefSeq) glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134002243
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssco01007
]
134002243
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
134002243
03029 Mitochondrial biogenesis [BR:
ssco03029
]
134002243
Enzymes [BR:
ssco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
134002243
Amino acid related enzymes [BR:
ssco01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
134002243
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
134002243
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
134002243
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Arg_repressor
DUF6778
Motif
Other DBs
NCBI-GeneID:
134002243
NCBI-ProteinID:
XP_062297532
LinkDB
All DBs
Position
20:complement(14539026..14545735)
Genome browser
AA seq
676 aa
AA seq
DB search
MEEVLAPLREAVREQGELVHRLKEQGASEPELSKAVGELKARKKILETKELALQPKEDTV
DRVKLEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQHFIQEEQILEID
CTMLTPEPVLKTSGHVDKFADYMVKDAKTGDCYRADHLLKAHLKNLMSDEKCSAEKVTQM
EDVITQMDNYTQQELADLFVKYNVKSPSTGNDLTPPVSFNLMFKTSIGPGGNTPGYLRPE
TAQGMFLNFKRLLEFNQGKLPFGAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPND
KVHPKFHNVADLDIKLFSSKAQTSGQSAQIMRLGDAVEQGVINNSVLGYFIGRIYLYLIK
VGLSKDKVRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHTRATKVP
LVAEKPLKEPKIVNVIQFEPKKGAIGTAYKKDAKFVLEYLSVCDECYISDQEKLLNENGE
FSFQTEGKTFKLTKDMVSVKRFQKTLHVEDIVPNVIEPSFGIGRIMYSIFEHSFHTRKGD
EQRTFFSFPATVAPYKCSILPLSQNQEFKPFVHQLSETMTKNGVSHKVDDSSGSIGRRYA
RSDEIGVAFGITIDFDTVKKTPHTATLRDRDSMRQIRAEVTELPGMVRNLANCSLTWAEV
ESKYPIFEGQESSKKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtgctggcacctttgagggaggctgtgagggaacagggtgaattggtgcat
cggttgaaagagcagggtgcctcagagccagagctgagcaaagctgttggagaactgaaa
gcccgcaagaagattcttgaaacgaaggagctggccttgcagcctaaagaggacacagtg
gacagagtgaagctggaggatactttaaagaggagattcttctatgatcaggcttttgcc
atatatggaggtgtgagtggcctatacgactttggccccgtgggctgcgccctgaagaac
aacattctgcaggtatggaggcagcacttcatccaagaggagcagatcctggagattgac
tgcaccatgttgactcctgaacctgtcctcaagacatcaggtcatgtggataaatttgct
gactatatggtgaaagatgccaagacaggagactgctaccgtgccgatcacctcctcaaa
gcccacttgaaaaacctgatgtcggatgagaaatgttcagcggagaaggtgacccagatg
gaggatgtaatcactcagatggacaactacactcagcaggagttggctgatctgtttgtg
aaatacaacgtgaagtctccctccacaggaaatgacctcacacctcccgtctccttcaac
ctgatgtttaagacgtctattggtccaggaggaaacacacccggctatctgaggcctgaa
acagctcagggaatgttccttaatttcaagcgtttactggagttcaaccaaggaaaactt
ccttttggtgctgctcagattggaaactccttcaggaatgagatctctcctcgttctgga
ctcattcgcgtgagggagttcaccatggcagagatcgagcactttgtggatccaaatgac
aaggtccaccctaaattccacaatgtggccgacctagatatcaagttgttctcctcaaag
gctcagaccagtggccagtctgcacagatcatgaggctgggagatgctgtggagcaggga
gtgatcaacaattctgtgttgggttacttcattggaagaatctacttgtatctaattaaa
gtcgggctgtcgaaagataaagtgcgcttccgtcagcacatggagaacgagatggctcac
tatgcatgtgactgctgggatgctgagtccaaaacctcctatggatggattgagattgtt
ggctgtgctgaccgttcctgctatgacctctcatgtcacaccagagccaccaaggtccct
ctagtggcagaaaagcccctgaaagaacccaaaatagtaaatgtcatccagtttgagccc
aaaaagggcgccataggcacggcatacaagaaagatgccaagtttgttttggaatacctg
tctgtctgcgatgaatgctatatcagtgatcaggagaagcttctcaatgaaaatggggag
ttcagctttcagacagaggggaaaacattcaaattgaccaaagacatggtcagtgtaaaa
aggttccagaagactttgcatgtggaggatattgttcccaatgtaatcgagccgtccttt
ggcatcggtcgaatcatgtactccatcttcgagcactcgttccacacccgaaagggggat
gaacagaggacgtttttcagttttcctgccactgtagctccatacaaatgttccatcctt
cctttgagccagaaccaggagtttaagccttttgtccaccaattatctgagacaatgacc
aaaaacggagtgtctcataaggtggatgactcctcaggatccattgggaggcgctacgcc
agatcagatgagatcggagtggcctttggcattaccatcgacttcgatactgtgaaaaag
acgcctcacacggccactctgagagaccgtgactcgatgaggcagatcagggctgaggtc
actgagttgccagggatggttcgaaatctggctaactgcagcttgacatgggctgaggtg
gagagcaagtaccccatctttgaaggacaggagtccagcaagaaggagtaa
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