Scomber scombrus (Atlantic mackerel): 134002255
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Entry
134002255 CDS
T10651
Name
(RefSeq) cytoskeletal protein Sojo-like isoform X1
KO
K23284
C1q-related factor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134002255
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Opsonins
134002255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1q
CEP162_helical_1
CCDC39
ATG16
Csm1_N
PMD1-like
Par-4_C
FKBP15
PUMA_CC
GAS
ZapB_rel
DUF724
CCDC110
Tropomyosin
ABC_tran_CTD
HH_AprE
CCDC122
FPP
CCDC18_1st
ODF2_C
SPC25_N
Uso1_p115_C
TPR_MLP1_2
BclA_C
UPF0242
CENP-F_leu_zip
DUF601
CEP89
DUF3450
CEP83_CC_1st
Shugoshin_N
CC_Bre1
CCDC192
DUF7310
NYD-SP28_assoc
CEP135_TSGA10_CC
HMMR_N
Rod_CreS
Fez1
Herpes_UL6
bZIP_2
bZIP_1
KLRAQ
Motif
Other DBs
NCBI-GeneID:
134002255
NCBI-ProteinID:
XP_062297549
LinkDB
All DBs
Position
20:complement(11521215..11528784)
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AA seq
456 aa
AA seq
DB search
MRRAAAFLVLLLCLYWTRAQGESGGVTGNDITQTEVQSEILAVKATSDQTNITPDIWAEL
KGLRDMAIEHSVELRTARARWRSWSRRFIVSIPAIQARLTTSESKNTVLEARLAASESKN
AALEERMSSSENQTKMNASENVVKELQRENTVLEARMNTSEKEVEELKRENTVLEARMSS
SENEVEELKRQNTVLEARMSSSENEVVKLQIQNAVLKARLNSSENVMEELKREYTVLESR
MSSSENEVEELKRQNTVLEARMSSSENEVVKLQIQNAVLKARLNSSENVMEELKREYTVL
ESRMSSSENEVEELKRVNADRPKVAFSAALTDEGKVGPFSTDSTLKFSKIFTNIGQAYSP
ITGIFTAPVRGAYYFRFHGFESRTSMIIGIGLYHNDKKITVSYDTEDDIGHVTVSNAFVL
ELEKGDVIYLVLISTCGVYDDLNNRTTFSGFLLYAL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtgctgcagcttttctggtgttgctgctctgtctgtactggacgagggctcag
ggtgagagtggaggggtgacagggaatgatatcactcagacggaggttcagtctgagatc
ctggctgtcaaagcaaccagtgatcagaccaacatcacccctgatatctgggctgagctg
aaggggctgagagacatggccatcgaacacagtgtggagctgagaacagcaagagcaaga
tggagaagctggagcaggagatttattgtttctattccagccatacaggccagactgaca
accagtgaaagcaagaatacagttttggaggcccgactggcagccagtgaaagcaagaat
gcagcgttggaggaaagaatgagctccagtgaaaaccagaccaaaatgaacgccagtgaa
aatgtggtcaaggagctccagagagagaacacagttttggaggccagaatgaacaccagt
gaaaaagaggtggaggaactgaagagggagaacacagtgttggaggccagaatgagctcc
agtgaaaacgaggtggaggagcttaagagacagaatacagtgttggaggccagaatgagc
tccagtgaaaacgaggtggtaaagctccagatacagaatgcagtgttgaaggccagattg
aactccagtgaaaatgtgatggaggagctcaagagagagtacacagtgttagagtccaga
atgagctccagtgaaaacgaggtggaggagctcaagagacagaatacagtgttggaggcc
agaatgagctccagtgaaaacgaggtggtaaagctccagatacagaatgcagtgttgaag
gccagattgaactccagtgaaaatgtgatggaggagctcaagagagagtacacagtgtta
gagtccagaatgagctccagtgaaaatgaggtggaggagctgaagagagtgaatgcagac
cgaccaaaggtggcattttctgctgccctaactgacgaaggaaaagttggacccttcagt
actgacagcacacttaagttcagtaaaattttcaccaacatcggccaggcttatagccca
attacaggtatctttacagcaccagtcagaggagcctactacttcagattccatgggttt
gaatcacggacatcaatgataataggtattggactgtatcacaatgacaagaaaattact
gttagttatgatacagaggatgacattggtcatgtcactgtgtctaatgcatttgttctt
gaactggaaaagggagatgtgatctacctggtcctcatctcaacctgtggtgtttatgat
gatctcaataatcgtaccacttttagcggattcctactttatgctctgtga
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