Scomber scombrus (Atlantic mackerel): 134002278
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Entry
134002278 CDS
T10651
Symbol
chpf2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssco01100
Metabolic pathways
Module
ssco_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
134002278 (chpf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
134002278 (chpf2)
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
134002278 (chpf2)
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
O-Glycan
134002278 (chpf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
134002278
NCBI-ProteinID:
XP_062297587
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All DBs
Position
20:21149776..21154172
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AA seq
762 aa
AA seq
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MRLSSFLAVFRPALPLILGLSLGCSLSLLMVSWTQGDTDDSCRDELGNGGLFPGRGEAQR
DSRDGGAEEDFQPRIVPYHKDPNKPHKKVLRTRYIHTELGIRERLLVGVLTSRATLNTLA
VAVNRTVAHHFHRTFFFTGLRSPKVPHGMTVVAHGDDRPVWLMYETVRHLHQHYGSDYDW
FLLAQDDTYMQADRLSELVSHLSAGQDLYMGRAEEFIGGEEKARYCHGGYGYLLSRSLLA
RLQPHLDTCRNDILSVRPDEWLGRCIIDYLGLSCVEVHQEMTYRYFELGKNADPEREDSA
QFKNAFTVHPVSEPNLMYRLHKRFSQIELEWTYLQIQQLQMQISNLSDLTPEGKAGVTWP
VGINPPFKPRTRFEVINWEYFTEEHIYTCVDSSPKCEMRGADRADVNAVLEIAVERLNER
YQPQLRFRKRRLLNGYRRFDPTRGMEYVLDLALEAYTQKGHSQVIAKRVNLLRPLSAVEI
IPMPYVTEATRVQVILPVTAQDQDYVGNFLDMYVMNTLDTHDNVLLTFLFIYDPFDAQRV
SQTDVFAGIKAMIGEVEKRYGDVKIPWISVKTEVPSQVKLMDIISKKHPVDTLFFLASVW
TEVNADFLNRCRMNAISNWQVFFPVHFQEFNPAVVYREQQPSAASSFSESLRDGHFDRHV
FDEACFYNADYMTARTKMAADILDNEELLESMDVYDIFVRYSGLHVFRAVEPALIQKYVR
RSCNPRFSEDIYHRCVLSNLEGLGSRSHLAMALFEQEQANST
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctcctcttttttggccgtgttcaggcctgctttgccccttatcctcgggctg
tccctgggctgcagcttgagtcttttaatggtgtcctggacacaaggggacacggatgac
tcctgcagggatgagctgggcaatggggggcttttccctggcagaggggaagctcagaga
gactcgagggatgggggtgcagaggaagacttccagccacgtatagttccctatcacaag
gatccaaacaagccacacaagaaagtcctcagaacacggtatattcacactgaactgggc
atcagggagcgactgctggtgggcgtactaacctctcgggcaaccctcaacacgctcgcc
gtggcggtgaaccgaacggtcgcccaccacttccaccgcaccttcttcttcactggcctg
cgcagccccaaggtgccccatggcatgactgtggttgcccacggcgacgaccgccccgtg
tggctgatgtacgagacggttcgtcacctccaccagcactacggctcggactacgactgg
ttcctcttggcgcaggacgacacttacatgcaggccgatcgtctttcggagctcgtcagc
cacctcagcgcaggtcaggacttgtatatgggaagggcggaggagttcataggtggggag
gagaaggcacgctactgccacgggggttacggctacctgctgtctcgcagtctgctggcc
cgtctgcagccccacctcgacacttgccgtaatgacatcctcagcgtgagacctgatgag
tggctgggccgctgtatcattgactatctaggtctcagctgtgtggaagtacaccaggag
atgacgtatcgttactttgagcttggaaagaacgcagatccagagcgtgaagatagcgca
cagtttaaaaacgccttcaccgtccatcccgtatcagaaccaaatctcatgtaccgccta
cataaacgtttcagccagattgagctggagtggacttatctacaaatccagcagctgcag
atgcagatcagcaacctcagtgacttgacaccagaagggaaggcgggagtcacttggcct
gtaggaatcaatcctcccttcaaaccgaggacccgttttgaggttataaactgggagtac
ttcactgaagagcatatttatacgtgcgtcgacagctcgcccaagtgtgagatgagaggg
gctgaccgcgccgatgtaaatgcagttctggagatcgcggtagagcgtctgaacgagcgc
taccagccgcagctacgcttccgcaagcgacgtctactgaacggataccgccgcttcgac
cccacgcgcggtatggagtatgtgctggatcttgcactggaggcctacactcagaaaggc
cacagccaagtcattgccaaacgggttaacttgttgcgacctctaagtgcagttgaaatt
atccccatgccttatgtgacagaggcgacacgggtgcaggtcatcctacctgtcacggcc
caggatcaagactatgtcggtaacttcttggacatgtatgtgatgaacactttggacacg
catgacaacgttttactcacgttcttgttcatctacgatcccttcgatgcgcagcgagtc
agccagaccgatgtgttcgctggcatcaaggcgatgatcggggaggtggagaagcgctac
ggagacgtgaagatcccgtggatcagcgtgaagaccgaggttccctcacaggtcaagctg
atggacatcatctctaagaagcacccggtggacacgctgttcttcctggccagcgtgtgg
acggaggtcaacgcagatttcctgaaccgctgcagaatgaatgccatcagcaactggcag
gtcttcttccccgtccacttccaagagttcaacccggctgtcgtctaccgcgagcagcaa
ccatccgccgcctcctccttctccgagtccctgcgagacggccacttcgaccgccacgtc
tttgacgaggcttgcttctacaacgcagactacatgacagcacggaccaagatggcggcc
gacatcctggacaacgaggagctgctggagagcatggacgtgtacgacatattcgtgcgt
tactccggcctgcacgtgttccgagccgtagagcccgcgctgatccagaaatacgtgcgg
cggtcgtgcaacccgaggttcagcgaggacatctaccaccgctgtgtcctcagcaacctg
gagggtctggggtcacgctcccatctagccatggctctgtttgagcaagagcaggccaac
agcacctag
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