Scomber scombrus (Atlantic mackerel): 134002294
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Entry
134002294 CDS
T10651
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134002294 (nup58)
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Siah-Interact_N
PSY3
Nup49_C
FapA
Motif
Other DBs
NCBI-GeneID:
134002294
NCBI-ProteinID:
XP_062297612
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Position
20:complement(10238635..10252892)
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AA seq
600 aa
AA seq
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MSGFNFGSGGLAATNAGAGFSFGAATSAPAANTGGFSFGTALGTAAPTPAASTTTSTPSL
GLGGSLFGQKPPGGFSFNTPASSAAAPTAGLTLGAPASTGASTGFSLAFNKPTASATPFS
LTTTSTTSSAPAGAGLTFGSVLTSTAPQQPAAAGFTLGLGGSTTTAAAAAVPSLGGGLFS
NTAATGLGQTLGGVGGGLTLGSLLATSTVAPAAPAPSIGLGGVDFSTSSENKSDTSSGAN
AQDSKALKDENLPPVICQDVENFQKFVKEQKQVQEDISRMSSKAISKVQDDIKNLKQLLS
VSASGLQRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFHCLVEQFEV
QLQQYRQQIEELENHLTTQSTGSHITPQDLTLAMQKLYQTFVAQAAQLQSVHENVKILKH
QYLSYRRAFLEDSTDVFESKRTSNRKWQSAPRVTTGPAPFSSVPNAAAVAMAATLTQQQQ
PTTGTQAPLGAGFGNPFASAVGTSLGSSTLGGFGGGPGFGGVGTGGSSFAFSSTSKPTGG
SLSAGFGSSSSSGFNFSNPGLNPSAGLTFGVSNQPAAGFVTGGPLLQLKKPPAGNKRGKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctttaacttcggatcagggggtcttgccgccaccaacgccggtgcgggattc
tcattcggggccgcaaccagtgcacctgcggccaatactggtggcttctcctttggaact
gctttgggtacagcagccccaactcctgctgcctccaccaccaccagcaccccgtccctt
ggcctaggaggcagtctctttggtcagaaacctcctgggggattttctttcaacacacct
gcctcaagtgctgctgcacccactgctggccttacgttaggtgccccagcatccacaggt
gcctccactggcttcagcttggccttcaacaagcccactgcatcagcaacacctttctcc
ctcaccaccacctctaccacctcgtcagcccctgccggggcaggtttaacatttggctct
gtcctgacctccactgctccacaacagccagcagccgcaggcttcaccctcgggctcggt
ggttcaacgacaacagcagcagctgcagcagtcccatcactaggcgggggtctcttttcc
aacactgcggctacaggtttgggtcagactcttggaggagtaggaggaggtttaacgttg
ggttctctgttagctacctctacagtagcgccagccgctccagctcctagtatcggttta
ggtggcgtcgacttcagcacttcttctgagaataaaagcgacacgtcatctggagccaat
gcacaggacagtaaagctttaaaagatgagaacctgcctccggtcatctgtcaggatgtc
gagaatttccaaaaatttgttaaagagcagaaacaggttcaggaggacataagcaggatg
tcatccaaggccatctctaaagtccaagatgacatcaagaacctcaaacagcttctctcc
gtcagtgccagcggtctgcaacgtcaggctctggccattgacaagctgaagctggagaca
gcacaggagctgaaaaatgctgacatagcactgcgtacacaaaagactcctcctggactt
caacatgagaacactgctccatcagattatttccactgcctggtagagcagtttgaggtg
cagctgcagcagtaccggcagcagatagaagagctggagaaccacctgacaacgcagagc
actggctctcacatcacccctcaggacttgaccctggccatgcagaagctgtatcagaca
tttgttgcacaagctgcccagctccagtctgtccatgagaatgtcaagatcttgaagcac
cagtacctttcctatcgtcgggccttcctggaagactccacagatgttttcgagtccaaa
cggacatcaaacaggaagtggcagagtgcgccgcgtgtcacaacagggcctgccccattc
tccagtgtgccaaacgctgcagcggttgccatggcagccacattgacccagcaacagcag
ccaactacagggacccaggcacccttgggggcagggtttggaaacccctttgcctcggca
gttggcactagcttgggctcctctactcttggaggttttggtggtgggccaggatttggt
ggggtggggactgggggttcttcttttgccttctcctccaccagtaagcccacaggaggc
agtctgagtgcaggttttggcagcagcagcagctcaggctttaacttcagtaaccctggc
ctcaacccctcagccggcctgaccttcggtgtgtctaaccaacctgcagcaggctttgtc
acaggagggcccctgctccagctcaagaagccccctgctggtaacaaaaggggcaagaga
taa
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