Scomber scombrus (Atlantic mackerel): 134002329
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Entry
134002329 CDS
T10651
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Cilium and associated proteins [BR:
ssco03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
134002329 (nphp3)
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NCBI-GeneID:
134002329
NCBI-ProteinID:
XP_062297651
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Position
20:complement(15500927..15536251)
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AA seq
1302 aa
AA seq
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MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLESKLQQLQAQ
GIQVYDPNDSDSDDNQTTVTAAGTQCEYWTGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DIEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLISTQETKAELDIFIKKHSP
VLRRLCEGLGHFYLNVCFPEDTAASYAVERKQEIERSSVCVLLVKSTVSSSVVEDCEEAF
VKNPDGHPLVLYLRTEEDHNLTGPTRQLLERVNAADKAAKVKVVDHSGSAEDGAYLIYAQ
LEKVIKQELLGLEGADVDSKDSGIEEGREEDSGDVLWDLHDEQEQIESYQQACSSTNSQL
GFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKQSPNTLFLYHFVGRP
LSTSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDS
IDQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSVVNAE
CQTMDLKLAKDQEKKLERHCRSASTCNALYVTLLARMITSSSSCWSLEKSLEQCLQCQDT
MSLYRLALKMTLNSLNNDRERHVMREILCLVCASHNGVSESEVQDLFPELELSVLSSLLY
CLNRLCIVTLRCGLFRFHHLQAWEAVRLEFLGGGSSSATYREKLIHYFSQQLSHDRVTWR
VADELPWLLQQQEDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKNSMAAEYFD
SLKHYEKSCESEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSV
ARSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKYE
QAEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSADSAKTLNELGVLYY
LQNNLDAAKVFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDI
RKRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVN
LAVIYCQLKKHNDALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFENAAELY
KRAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAPLPQAPR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcatcctctttggtaagcccaggggaggtgattgaggatgggtacggaggt
gaaggtggggaagcctgtgagattccggtggaggtcaagcccaaagcccggctcctgcgt
agctcctttcgcagaggaccccgggtgattggggccagtttcaaatccacaggctctgta
gatctagagtatgcagcagagtatgaaagactccgcaaagagtatgagatcttccgtgtc
agcaagaacaacgagatctcatcaatgcaaaagaaggaggccaagctcgatgaggagaac
aaaaggctgagggctgagctacaggctttgcaaaagacctaccagaagatcctgagagag
aaagagagtgctctcgaggcaaagtaccaagctatggagagagctgccacctttgaacat
gacagggacaaagtaaaacgacagtttaagatcttccgggagacgaaggagaaagagatt
caggatctcctgcgagccaagagggacttagagtccaaacttcaacagttgcaggctcag
ggcatccaagtctacgatccaaatgactctgattcagatgacaaccaaactactgtgaca
gctgcagggacacagtgtgagtactggactggtggcgtgctgggaagtgagccctctatg
ggtagcatgatgcagctgcaacagaccttccgaggacccgagtttgcacatagtttgata
gatatagagggaccctttgcaaatgtgagcagagatgactgggatgctgcagtggccagt
ctgcttcaggtctcccctcatgtgcctcaggccttgtggagtaacacagtacgctgctac
ctaatctctacccaggagaccaaagcagagctggatatctttatcaagaaacactctcct
gtgctgcggaggttgtgcgagggtttaggccatttctatctaaatgtctgcttcccagag
gacactgctgcctcttatgctgtggagcgcaagcaagagattgaaaggagctctgtgtgt
gtgcttcttgtcaaatccactgtcagtagctctgtggtggaggattgtgaggaagctttt
gtgaagaatccagatggccatcccctggtactctacctcaggactgaagaagatcacaat
ttgaccggacctaccaggcagctgctggaaagggtcaatgctgcagacaaggctgctaaa
gtcaaggtggtagatcacagcggttctgcagaggatggagcttacctgatttatgctcaa
ctcgagaaagtcatcaaacaggagttgctgggtcttgaaggagcagatgttgactctaag
gactctgggatagaggagggacgtgaggaagactcaggagacgtgctgtgggacctgcat
gatgaacaggaacagattgagtcctatcagcaggcttgtagcagcaccaactcacagtta
ggtttccagaagtatatagatcgtctgaatgacatgatagctgctccccctcccacccct
cctctgctagtatctggtggtccaggctcaggaaaatctctcctgctgtctaaatggatt
gagctgcagcagaagcagtcccctaacaccttgttcctttatcattttgttggtcgccct
ctttctacaagctcagagccagttctcatcatcaaacgcctcacagtgaaactgctgcag
cacttctggtccatttctggtttgtccatggagcccagtaagatcttggaggagtttccc
cgctggcttgaaaggctatcagcccgccatcaaggaaacattattattatcatcgactcc
attgaccaaatacagcaagcagaaagacacatgaagtggctgattgaccctctccctgtc
aatgttagagtggtggtgtctgtcaatgtggagacatgtcctcaagcctggagattgtgg
cccacactccacttagacccattgagtcccagagaagtcaggagtgttgttaatgcagag
tgccagacaatggacctcaaacttgccaaggatcaggagaaaaagctggaaaggcactgc
cgctctgcatcgacctgtaatgcattgtatgtcacactactggcaaggatgatcaccagc
agtagctcgtgttggtcactggagaagagccttgagcagtgcctacagtgtcaggacacc
atgtcactctaccgcctggcacttaagatgacacttaactccctcaacaatgacagggag
cgacacgtcatgagagagatactgtgccttgtatgtgccagccataatggagtgagtgaa
tcagaggtacaagaccttttcccagaactggaattgtctgttctgtcttcactgctctac
tgcctgaacagactctgcattgtaaccctccgctgtgggctattcaggtttcatcacttg
caggcttgggaagctgtgaggttggagtttctgggtggaggaagcagctctgctacttac
agagagaaactgatccattacttcagccagcaactcagccatgatcgtgtgacgtggcgt
gtagcagatgagctgccctggctgctccaacagcaggaggaccggactaaactgcaactc
agcctcttaaacctgtttgtctcccaaaatctctacaagaggggtcatttctctgagctg
ctagcctattggcagtatgtgggcaaagacaagaactccatggccgctgagtactttgac
tccctgaaacactacgagaagagctgtgagagtgaagacagcatgaccaagctagctaac
ttgtatgagactttaggacgtttccttaaagacttaggccttcctagtcaggcagtggcc
cctttacaaagatcccttgagataagggagacagctctggacccggaccatcccagtgta
gctcgctctctgcaccagctggcaggtgtttatgttcaatggaagaagtacggtaacgct
gagcagctgtacaagcaggccctggagataagtgagaacgcttatggtgctgagcacgcc
agcgtggcacgagaactggagtcactcgccatgctctaccagaaacagaacaaatatgaa
caggcagagaaactcaggaagaggtctgtgaaaatacgccaaaaaactgctcgccagaaa
ggtcatatgtatggttttaccttgttgagacgcagagccctacagctggaagagctaacc
ctggggaaagactctgctgactctgcaaagacactcaatgaactgggtgtcctgtactat
ctccaaaacaacctggatgcagccaaggtgttcctgacccgctctctagaaatgcgtcag
cgtgtccttggtccagatcacccagactgtgctcagtccctcaacaacctagctgcactg
cacacggagagaagggagtatgaaacagctgaggatatgtatgagagagcgctggacatc
cgcaagagggccttgtccccagaccacccctccctggcatacacactcaaacacctggcc
atgctatacaaacgcagagggaagctggagaaggctgtgccactgtatgaactgtctctg
gaaatcagggaaaaaagttttggacccaaacatcccagtgtggccacagcactggtcaac
ctggctgtaatctactgccaactgaagaagcacaatgatgccttgcctttatatgaacga
gcactgaaagtgtatgaagatagcttgggccgctcacatccacgtgttggagagacttta
aaaaacctggctgtgcttagctatgaagagggggactttgagaacgcagcagagctttac
aagcgtgcaatggagatcaaagaggcagagccatcattggtgtgtgggaatgctccatcc
cgccactcctccagtggggacacattcagtctgaggggacctgcccccctcccacaagcc
ccgaggtga
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