Scomber scombrus (Atlantic mackerel): 134002358
Help
Entry
134002358 CDS
T10651
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03030
DNA replication
ssco03410
Base excision repair
ssco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134002358 (fen1)
03410 Base excision repair
134002358 (fen1)
03450 Non-homologous end-joining
134002358 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssco03032
]
134002358 (fen1)
03400 DNA repair and recombination proteins [BR:
ssco03400
]
134002358 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
134002358 (fen1)
DNA replication proteins [BR:
ssco03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
134002358 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
134002358 (fen1)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
134002358 (fen1)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134002358 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
BrxL_N
Motif
Other DBs
NCBI-GeneID:
134002358
NCBI-ProteinID:
XP_062297686
LinkDB
All DBs
Position
20:complement(9174940..9180905)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADQAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEYGIKPVYVFDGKPPQMKSGELEKRVERRAEAEKLLAQAQEMGEQ
ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTNVLLRHLTASEAKKLPIQEFHLSRVMQEIGLTNEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGCIEEILENIDSNKHPAPEDWLYKEARGLFLTPEVVDCSTVDLKWSE
PDDEGLIQFMCTEKQFSEDRIRNGCKKILKSRQGSTQGRLDSFFTVTGSLSSKRKEPEVK
GSAKKKQKTGATPGKFRKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacacggacttgccaagctgattgctgaccaggcgcctggtgctataaaagag
caagacatcaagaactacttcggaaggaaaattgctatagatgcctctatgtgcatctac
cagttcctgattgcagtgcgacaggacggcaacgtgctgcagaatgaggatggagagacg
acaagccacctgatgggaatgttctaccggacaatccgcatgctggagtacggcatcaaa
cctgtgtatgtgtttgatggcaaacccccacagatgaagtcaggagagctggagaagaga
gtggagagacgggcggaagctgagaagttgcttgcacaagcccaggaaatgggtgaacaa
gagaacattgacaaattctccaagcgtctggtaaaagtcaccaggcagcataatgatgag
tgcaagaagctgttgaccctgatgggagtcccttacatcgaggctccatgtgaggctgag
gccagctgtgccgctctagtgaaagcaggcaaggtctttgccacagcaacagaggatatg
gacgggctgacctttgggacgaacgtcctgctcagacacctcactgccagcgaagcaaag
aaacttcctattcaagaattccaccttagtcgcgtcatgcaggagattggcctgacaaat
gaacagttcatagacctgtgtatccttctgggctgtgactactgtggaaccatcaaggga
atcggccccaagagagccattgacctgatcagacagcacggctgcatcgaggaaatccta
gaaaacattgactctaataagcatcctgctccagaggactggttatacaaggaggccagg
ggcttgtttttgactcccgaggtggtggattgttccacagtggatctgaagtggagtgaa
ccggatgatgagggactgatccagttcatgtgtactgagaaacaattcagtgaggacaga
atccgtaatggttgtaagaagattttaaagagccggcagggcagcacacagggacgactg
gactctttcttcactgtcacaggatctctgtcctccaaacgaaaggagcctgaagttaaa
ggatcagctaagaagaagcagaagactggagctacgccgggcaaatttagaaagggcaaa
tag
DBGET
integrated database retrieval system
