Scomber scombrus (Atlantic mackerel): 134002373
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Entry
134002373 CDS
T10651
Symbol
ipo4
Name
(RefSeq) importin-4
KO
K20221
importin-4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134002373 (ipo4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
134002373 (ipo4)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
134002373 (ipo4)
Pre-60S particles
134002373 (ipo4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IPO5
HEAT_EZ
HEAT_GCN1
HEAT
HEAT_2
TPR_IMB1
IBN_N
HEAT_MROH2B_C
Cnd1
TOR1L1_N
HEAT_ECM29
HEAT_EF3_N
Vac14_Fab1_bd
RIX1
HEAT_IPO9_c
UME
Ltn1_1st
IFRD
TPR_DNAAF5
ARM_ECM29
INTS7_N
ParcG
MMS19_C
mTOR_dom
HEAT_Maestro_2
HEAT_GCN1_C_2
Xpo1
Sec7-like_HUS
U3snoRNP10
HEAT_SCC3-SA
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
134002373
NCBI-ProteinID:
XP_062297698
LinkDB
All DBs
Position
20:9197141..9207958
Genome browser
AA seq
1088 aa
AA seq
DB search
MTEELEQILSQLTQPDNAVIQQATAQLKQAFKDPAIIPALCAVMSSSQNPQIRQSAAVML
RLRVKKHWKKISPNDRESLKAVVLQAFMQETEHTVQHSLSQLCAVMVKHETPDRWPALLQ
LLNESTKSSNPHDRQVGLLLLNKVMESNPEPFKPHYCQLLQLFSTVLQDHNNPTALYYCI
LTLTAITAYTGSEEMNQMRSIIPSLIVALKHLIKADQSQASEAMEVFNELMESEVSIIVP
HVADMVRFWVEVGSDTALTDSVRVKALSCIAFLIKLKSKTVLKQKLLNPILQAIFPVLTA
VPPPGEEDPEDEEDDSGDGTDNDNPKHCAAQIIDTMALHMPPEKLFQQLMPFAQTCLASE
NPYQRKGGLMCLAVLAEGCADHIRTKMLSSVLQTVCQSLSDSNEVVRSAALFALGQFSEH
LQPEVSKYCEELMPLLLGYLSSLNQSKVGHVTKAFYALENFMENLGADIEPYLPTLMETM
LSALNNTDSLKIKELAVSAIGAIANAAKELLVPYFPPVIESLKGFLTTTTEEMRSLQTQS
LDTLSVLARTIGKDVFSPLAAECVQLGLNLTDTIDDPDLRRCTYSLYSAVSTVSPDCLTP
HLTAITTVMLLALKSNEGITAHLEEDKTFVLLDDDDDDDHNEEEKDSDFLEDETETDIHD
IAGFSVENAYIDEKEDACDALGEIALNTGAVFQPFLESSFQQVYEMRDFPHEDVRRAAFG
AMGQFCRSQHKVWTENPNEANHLALLKLLDVVLPCFLETVRTENERQVVMGVLETMNHVM
KSCKEEAFKNPARLKEVSHAIRDVLKKKTACQDGGGDEPDDEDQQAEYDAMLQEFAGEGI
PLVASSVPADSFAPFLNDLLPLIMSKAKSSCTVADRSFAVGTIGEILQALVSVSGGRGVA
GRLSNRLLPVLVAGVRDSDPEVRNNSVFGLGCLAQAAGPIVVSDYPMMLSVFSNMLSKES
DLRVIDNLCAALCRMILSNVEAVPLEQVVPALVNRLPLKEDLEENKTVFSCLAMLYKHSP
AMIVKLMKPIVAASSHVLGNKDVDNETQNALAVLMKEFTQQHSADFQAAVTSLPGEQQAM
LSAAIASS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaactggagcagatcctgtcacagctgacacagcctgacaatgcagttatt
cagcaggccacagcccagctgaaacaggctttcaaagacccagccataatcccagctctt
tgtgcagtcatgagcagctcccaaaacccccagattcgacagtcagctgcagtgatgctg
cggttgagagtgaagaagcactggaagaaaatcagtcctaatgatagagagagcctgaag
gcagtggtgttgcaggctttcatgcaggaaacagaacacaccgtgcagcactcactgtcc
caactgtgtgcagtgatggtcaaacatgagacaccagaccgctggcctgccctgctgcag
ctcctcaatgagtccaccaagagcagcaatcctcatgacagacaggttggcctcctgctg
ctgaacaaggtgatggagtccaaccctgaacctttcaagcctcattactgccagctgctg
cagctgttcagcactgtactgcaggaccacaacaacccaacggccttgtactactgcatc
ctcaccctcacagccataactgcatacactggctctgaagagatgaatcagatgcgttct
atcatcccaagtctgattgttgctctgaaacacctcataaaggcagatcagagccaagcc
agcgaggcaatggaggtgtttaatgagctcatggagagtgaggtgtccatcattgtgcct
catgttgcagacatggttcgcttctgggtggaggtgggcagtgacactgcactgacagac
tctgtgagagtgaaagcactctcttgcatcgcctttctcattaagttgaaaagcaagact
gtgctgaagcagaagctgctgaaccccatcctgcaggccatttttcctgtgctgactgca
gtgcctccgcctggtgaggaggacccagaggatgaagaggatgacagtggtgatggcaca
gacaatgacaatcctaaacactgtgcagctcagatcattgacacaatggcactccatatg
cctccagagaaactgttccagcaactgatgccgttcgctcaaacctgccttgccagtgaa
aacccctatcagaggaagggcggtctgatgtgtcttgcagtgttggctgaaggatgtgct
gatcacatacgcaccaagatgctgtcatcagtgctgcagacagtgtgtcagagtctttct
gacagtaatgaggtggtgcgcagtgctgccctcttcgccctcggacagttctctgaacat
ttacagcctgaagtgagtaagtactgtgaggagttgatgcctttgcttctgggctacctg
tcatccttgaaccagtcaaaggtcggccatgtcaccaaagccttttatgccctggagaac
ttcatggagaacttgggagcagatattgagccctacctgcccaccctgatggagactatg
ttgtctgccctcaacaacacagacagcctcaagataaaagaacttgctgtgtctgccata
ggtgccatagccaatgctgccaaggagttgctggtgccctacttccctccagttattgaa
agcctgaagggcttcttgactactaccacagaggaaatgaggtctctgcaaactcagtcc
ttggataccctctctgtgctggcccgtaccattggcaaagatgtgttcagtcctcttgct
gcagagtgcgttcagctcggactcaacctcactgacaccattgatgaccccgacctgaga
cgctgcacgtacagtctatactctgctgtgtccaccgtcagcccagactgcttgactcct
cacctcactgccattactacagtcatgctgctcgccctcaagtccaatgaaggcatcacg
gcacaccttgaggaggacaaaacatttgtcttactggatgatgatgacgatgatgaccac
aatgaagaagaaaaagattctgattttctggaagatgagactgagacagacatccatgat
attgcagggttcagtgtggaaaatgcttacatcgatgagaaggaggatgcctgcgatgca
ctgggagagattgcccttaacaccggcgctgtcttccagcccttcctggagtccagcttc
cagcaggtttacgagatgagagattttccccacgaggacgtccgccgggcagcgttcgga
gccatgggccagttttgtcgatctcagcacaaagtgtggacagagaatcccaatgaggcc
aaccacttagccctgctgaagctgctggacgtggtgctgccttgcttcttggaaacagtg
cggacagagaatgaacggcaggttgtgatgggcgttctggaaactatgaaccatgtcatg
aagtcctgcaaggaggaggctttcaaaaaccctgcacgcctcaaggaggtcagccacgcc
atccgtgacgtgctcaagaaaaagaccgcatgtcaggatggtggtggcgatgaacccgac
gatgaagaccaacaggcggagtatgatgcaatgctccaagagtttgccggcgagggaatt
cccctggtggcctcttctgttcctgccgacagctttgccccattcctcaacgacctcctg
cctctcatcatgagcaaagctaaatcttcatgcacagtggcagacaggtccttcgcagtg
ggaacgattggagagatcctgcaggctctcgtgagcgtgtccgggggccggggagtagca
ggccgactgtccaatcggttgcttcccgtcctggttgctggagtgagggacagtgaccca
gaggttcgcaacaacagcgtgtttggactgggatgtctggcccaggcagctggacccatc
gtagtatcagattatcccatgatgctgtcggtgttttccaacatgctgtctaaagagtcg
gacctcagggtgatcgacaacctgtgtgctgccctctgcaggatgatcttgagcaacgtg
gaggctgtccctctggagcaggtcgtgccagctctggtgaatcgccttcccctcaaagag
gacttggaggagaacaagactgtgttcagctgcctggctatgctctacaaacacagtcct
gctatgattgtgaagctaatgaagcccatagttgctgcttccagtcatgtcctgggaaac
aaagacgtcgataacgaaacccagaacgctttggctgtgctgatgaaagaattcacccag
cagcactctgcagacttccaagcagccgtgacctcacttcctggagagcagcaggccatg
ctcagtgcagccatcgcctcctcgtag
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integrated database retrieval system
