Scomber scombrus (Atlantic mackerel): 134002445
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Entry
134002445 CDS
T10651
Symbol
pex2
Name
(RefSeq) peroxisome biogenesis factor 2
KO
K06664
peroxin-2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
134002445 (pex2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
134002445 (pex2)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
134002445 (pex2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
Zn_ribbon_19
DUF8118
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
134002445
NCBI-ProteinID:
XP_062297775
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Position
20:complement(10598901..10607235)
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AA seq
330 aa
AA seq
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MDLESEDNQKSRVGGSGSETGVDPLTPVLRISQLDALELDTALEQLVWTQFSQCFQNCRP
GLLTPLEPELRALLQLLLWRFTLYSSSTTVGQSLLSLRYHNNLSSSPSYRLLSRRQKLSL
ALLTAGPRWLQERSHSLLLCLGLSSGWPVSEIGSGFLQKGLRNCLTLISSIAQLASLVNF
LVFLRKGHHPVLAERIVGARAVFSKPNVTRDITYQYMNRELLWHGFAEFLIFLLPLINTR
KLKATVCSILLGGESAGGDGGRDGQGVWKECGLCGEWPTMPHTVGCQHVFCYYCIRSYSI
ANTYITCPKCGAEAVQLEPVKMEVEMVGRL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaaagcgaggataaccagaaaagtagagttggaggttctggttcagaaacc
ggtgtcgacccactgactccagtattgcgcatcagccagctggatgcccttgagctggac
acagccctcgagcagctggtatggacccagttctcccagtgcttccagaattgccgcccg
ggcctgctcaccccgttggagccagaactgagagccctccttcagctgctcctgtggagg
ttcacactgtattccagcagcaccactgtgggccagtctttactgagcctgcgctaccac
aacaacctttcctcatcgccctcttacaggctactgtcccgcaggcagaagttgagtcta
gctctgctcacagcaggtccccgctggctccaggagcgctcccacagcctgctgctttgc
ttaggtttaagttcaggatggcctgtctctgaaattggtagcgggtttctccaaaaaggt
ctccgcaattgcctgactctcatttctagtatcgcccagctcgcaagccttgtcaacttc
ctcgtgttcctcaggaaaggtcaccaccctgtcctggctgaaaggatcgtgggagctcgg
gccgttttcagcaagcccaatgtgacccgcgacataacctaccagtacatgaaccgagag
ctgctgtggcacggctttgctgagttccttatcttccttttgccgctgatcaatacgagg
aaactgaaagcaacggtgtgttcgattctgctagggggagaaagtgcaggcggggatggc
gggagggatgggcaaggggtgtggaaagagtgcgggctgtgtggagagtggccgaccatg
cctcatacggtgggctgccagcatgttttctgctactactgcatcagaagttacagcata
gcaaacacatacatcacctgtcccaagtgtggcgcagaggcagtgcagctggagccggtc
aagatggaggtagaaatggttggcaggttatga
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integrated database retrieval system
