Scomber scombrus (Atlantic mackerel): 134002469
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Entry
134002469 CDS
T10651
Symbol
abcf2b
Name
(RefSeq) ATP-binding cassette, sub-family F, member 2b
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
134002469 (abcf2b)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
134002469 (abcf2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_28
AAA_18
MMR_HSR1
AAA_22
RsgA_GTPase
AAA_15
AAA_24
NACHT
AAA_14
AAA_33
VapE-like_dom
AAA_23
Dynamin_N
MukB
Motif
Other DBs
NCBI-GeneID:
134002469
NCBI-ProteinID:
XP_062297795
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All DBs
Position
20:complement(21139839..21146863)
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AA seq
611 aa
AA seq
DB search
MPSDLAKKKAAKKKEAAKARQRTKKPEDGSEEGEQGETELNGAQSNGIASLTKELDEFEL
AKAEARAVTGVLASHPNSTDVHVASLSLTFHGQELLADTSLELNSGRRYGLIGLNGTGKS
MLLSAIGAREIPIPEHIDIYHLTREMPPSEKTALHCVMEVDEQRIMLEKEAERLAAEDSE
CEKLMELYERLEELDADKAEVRASRILHGLGFSGEMQRKKMKDFSGGWRMRVALARALFI
KPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVLISHSQDFLNGVCTNIINLNLRKLKY
YTGNYDQYIKTREELEENQMKRFNWEQDQITHMKNYIARFGHGSAKLARQAQSKEKTLQK
MVASGLTEKVVNDKTLSFYFPPCGKIPPPVIMVQNVSFKYSDDTPHIYKNLEFGIDLDTR
VALVGPNGAGKSTLLKLLMGELLPCDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMK
CYPAIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTN
HLDIETIDALAEAINEFDGGMMLVSHDFRLIQQVAQEIWICENQTITKWNRDILAYKEHL
KSRIANQPHDI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgacttagccaagaagaaggcggcaaagaagaaggaggccgcgaaggctcgc
cagcgcaccaagaaacccgaggatggatccgaggaaggtgaacaaggagagaccgagctt
aatggagcacaaagcaatggtatcgccagtttgacaaaggaactggatgaatttgagctg
gccaaggcagaagctcgggcagtgaccggcgttctggcctcgcaccccaacagcactgat
gtccacgtcgccagcctgtcgctcactttccacggccaggagctgctagcagacaccagc
ctcgagctcaactcaggcagacgctatggcctcattggccttaacggcacaggaaaatcc
atgctgttgtcagccattggggcccgtgaaattcccattccagagcatatagatatttac
cacttgacccgggagatgccacccagcgaaaagacggctctgcactgtgtcatggaggtg
gacgagcagaggatcatgctggagaaggaagcagagagacttgccgccgaggactcggag
tgtgagaagctgatggagctgtacgagcgtctggaggagctggacgcagacaaggcagag
gtgcgagcctctcggatcctccacggtttgggtttcagcggcgagatgcagcggaagaaa
atgaaggacttcagtggaggctggaggatgcgcgttgctctggccagagctctgttcatc
aagcctttcatgttgctgctggatgagcccactaaccacttggatctggatgcctgtgtg
tggttggaagaggagctcaagacattcaagcgaatcctcgtgctcatctcccactctcaa
gacttcctgaacggtgtgtgcaccaacatcatcaacctgaatctgagaaagctgaaatac
tacacgggtaactatgaccagtatattaagaccagggaggagctggaagagaaccagatg
aagcgcttcaattgggagcaggaccagataacacacatgaagaattacattgccaggttt
ggtcacggttctgcaaagctggcgcgacaggcgcagagtaaggagaagacactgcagaag
atggtggcatcaggcttgactgaaaaagttgtgaatgacaagactctgtcattttatttt
cctccctgtgggaagattcctcctcctgttatcatggttcagaatgtgagcttcaagtac
agcgacgacacaccgcacatatataaaaacctggagtttggtatcgacttggatacacga
gtggctctggtggggcccaatggagcaggaaagtccacgctgctgaagctgctgatggga
gagctcctaccctgtgatggcatgatccgcaagcattctcacgtcaagataggcagatat
caccagcatctgacagagcagctggagctggacctgtctccgctggagtacatgatgaag
tgttaccctgctatcaaagaaaaggaggagatgaggaagatcattggtcgctacggcctg
acgggaaaacagcaggtcagtccgatcaggaacttgtcagatggccagaaatgtcgggtg
tgttttgcctggctggcctggcagaaccctcacatgctgttccttgacgagcccaccaat
cacttggatatcgagactatcgacgcgttggcagaagccatcaacgagtttgatggcggc
atgatgcttgttagccacgacttcaggctcatccagcaggtggctcaggagatctggatc
tgcgagaatcaaaccatcacaaagtggaacagggacatcctggcctacaaggagcacttg
aaatcaaggattgcgaatcaaccgcatgacatctaa
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