KEGG   Scomber scombrus (Atlantic mackerel): 134002533
Entry
134002533         CDS       T10651                                 
Symbol
tgif1
Name
(RefSeq) homeobox protein TGIF1
  KO
K19383  homeobox protein TGIF1
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    134002533 (tgif1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssco03000]
    134002533 (tgif1)
Transcription factors [BR:ssco03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain TALE
    134002533 (tgif1)
SSDB
Motif
Pfam: Homeobox_KN Homeodomain Homez
Other DBs
NCBI-GeneID: 134002533
NCBI-ProteinID: XP_062297864
LinkDB
Position
20:15657898..15662672
AA seq 302 aa
MKAKKGLMMLSGSETDDEDSVDAPLDLSSSAGSNGKRKRRGNLPKESVQILRDWLYEHRY
NAYPSEQEKALLSKQTQLSTLQVCNWFINARRRLLPEMLRKDGKDPNQFTISRKGSKAGD
SFSDSSQSPKHSSPAAGTEESYDKRVLHPSSFEPTMPVVLRKAVSPSIPSPTSTSPSPGL
IPTRPSVICHTTVTTAMQGSPTASHPSVPGVNSDRAAELLQSAQALLRCRDEGPGSQPLP
TTTTILSSTGMEGNLSPRSGLFNTPPPTPPDLTQDFSGFQLLVDVALKRAAEMELQAKQL
VS
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaaggcgaaaaaaggtttgatgatgctgtcggggagtgagacggatgacgaggacagc
gtggatgcccctctggatctgtcgtccagtgcggggagcaacggaaagaggaaacggcgg
gggaatctgcctaaggagtcagttcaaatcctcagggactggttgtacgagcaccgttac
aatgcttacccttccgaacaggagaaagctcttctgtccaagcagactcaactctccaca
ctgcaggtgtgcaactggttcattaatgcacggcggcgacttctcccagagatgctgcgg
aaagatggcaaagaccctaaccagttcaccatatccaggaaaggtagcaaggccggcgac
agcttctctgacagctctcagtccccgaaacacagcagccctgcagcaggtacagaggag
agctacgacaaacgtgttctccacccctccagctttgaacccaccatgcccgttgtcctc
aggaaggcagtttcaccctccataccctctcccacctctacatccccctccccggggctc
atacccacccgcccatctgtcatctgtcacaccactgtcaccacagcaatgcagggcagc
ccaacagcctcccacccctctgtgccaggagtgaactctgacagggcagctgagctgttg
cagtcagcacaggcactgctcaggtgccgggatgaagggccaggcagccagccactcccc
accactaccaccatcctcagcagcaccggcatggagggcaacctgagtccccgcagcggg
ctcttcaacacccctccccctacccctccagacctcacacaagacttcagcggcttccag
ctcctggtggacgtggcccttaaacgggccgcagagatggagctgcaagccaaacagctg
gtctcttga

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