Scomber scombrus (Atlantic mackerel): 134002558
Help
Entry
134002558 CDS
T10651
Symbol
relch
Name
(RefSeq) RAB11-binding protein RELCH homolog isoform X1
KO
K26154
RAB11-binding protein RELCH
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134002558 (relch)
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
134002558 (relch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
PPP2R1A-like_HEAT
Troponin
Adaptin_N
DUF4140
IFP_35_N
DUF1319
YwqH-like
HOOK
Motif
Other DBs
NCBI-GeneID:
134002558
NCBI-ProteinID:
XP_062297892
LinkDB
All DBs
Position
20:10800513..10833362
Genome browser
AA seq
1183 aa
AA seq
DB search
MASVNPFNLSDSEEEAERRPNETVDTERSPSDGAPGPPPGNPFSPPADAEPPTLLLSSNR
TSPSGEGISVSAAATSAMAGSADIRVSVDVIASHLLRDQYILTALEFHTELLEAGRELPR
LRDYFSNPGNFERQSGTPPAKDQVLGPGGPLNRAGSISTLDSLDFARYSDDGNRESDERV
AVLEFELRKAKETIQALRANLTQAAESEVSSQERKNFKSSPEIQEPVRPLEKRALNFLVN
EYLLKNEYKLSSITFSDENDDQDFELWDDVGLNIPKPPDLLQLYRNCGTPLPSPRDTADV
AVGVDLGDLPGNCFAQDLPKKPDLTQQQQTEVVQELEYQISLLNNEKQSLAEQIKKLQSE
IQTLKRTVSSSPPATLDLGSQNTSNPSCSSTIPPSTVPPTDNGQYLDIRGVSEPETDPGP
PSTQTTSQPHPQSHNKLKSRPPVQFDQPNRKLSPAFQQALLSFCRMCSDSRLGAEVSRIA
DSEESVMLMLGRCLPHIVPNVLLAKREELIPLILCTACLHPEPKERDQLLHILFNLIKRP
DDEQRQMILTGCVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAESCGALAPYLPK
EIRSSLVLSMLQQMLAEDKADMVREAVVKSLGIIMGYIDDPDKYSQGFELMLLSLGDPSE
RVVSAVHQVFIPAFAAWTTELGTLQTALIPSLLARIEKLLLQGEHGLDEHKLHVFLSALQ
SLIPPLFAVVLQNAPFTSRAKLHGDIPPIEVTRFPRPASPLQDVATIIGSREMLSALLQL
YDHQLEHEGTTGWDSLLWVVNQLLPQLIEIVGRINVTSSTCVHEFSRFFWRFCRTFGKIF
TNTKVKPQFQEILRLSEENVDASAGNGILTKATVPIYATGVLTCYNQDEDRKLLVGFLED
VMTTLSLSHAPLDSLKASFVELGANPVYHELLLTVLWYGVVHTSALVRCTAARMFELLVK
GVNETLVAQRVVPALITLSSDPEISVRISTIPAFGTIMETVTQKELLERVKMQLASFLED
PQYQDQHSLHMEIIRTFGRVGPNAEPRFRDEFVLPHLHKLALANNSQATESKRIDIATQL
FEAYSALSCCFISEEVMVNHFLPGLRCLRADMEQLSPEHEVILSSMIKECEIKVENRGMA
DAQGSMSIASSLVGEDAKTKFLSKMGQLTTSGAMLANVFQRKK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtcaacccgtttaatctaagtgattctgaggaagaggctgaacgccgtcca
aatgaaacagttgacacagagcgaagtccgagtgacggggctcccgggccaccgccaggc
aatcctttctccccgcctgcggacgccgaacctccgacgctgctgctgtctagcaaccgg
acaagccccagtggcgagggcatctcggtgtcggccgcagccacctctgctatggcaggc
agcgccgatatacgggtatcagtggatgtcattgcttctcatctattacgggaccagtac
atcctcacggccttggagtttcacaccgagctgttggaagcaggtagagagcttccgagg
ctgagagattatttctccaacccgggcaacttcgagcgacagagcggcactccgcccgca
aaagaccaggtactcggacctggcggaccgctgaatcgcgcaggcagcatcagcaccttg
gactctctggactttgcccgttactcagatgacggcaaccgagagtcagacgagcgggtg
gcagtgctggagtttgagctacggaaagcaaaggagaccattcaggctctgcgcgccaac
ttgactcaggcagcagagagcgaagtgtcctctcaggagagaaagaacttcaagtcaagt
cccgaaattcaggagcctgtacgcccactggagaaaagagccttaaacttccttgtgaat
gaatatttattaaaaaatgaatacaaactatcatccatcaccttctctgatgaaaatgat
gatcaggactttgagttgtgggatgatgtcggcctcaacatccccaaaccccctgaccta
ttgcagctctacaggaactgtggcaccccccttccttcacctcgggacacagctgatgtg
gcagtgggggtggatttgggtgatcttccaggaaactgctttgcccaagatctcccaaag
aaacctgacctcacacaacagcaacagacagaagttgtccaagagttggagtaccagatc
agcctccttaacaatgagaagcagagcctagctgagcagatcaagaaactgcagagtgag
attcagacattaaagcggactgtgtcctcctcacccccggccactctggatctaggctcc
cagaatacatccaacccctcctgctcttccaccatccctccctccaccgtgccccctaca
gataatggccagtatctggacatccggggtgtttcagagcctgaaactgaccccggtcct
ccctccactcagaccacgtcacagccccacccgcagtcccacaacaagcttaagagtcgg
ccacccgtccagtttgaccaaccaaacaggaagttatccccagccttccagcaagccctg
ttgtccttctgcagaatgtgctctgacagccgactaggagcagaggtgtctcgtatagca
gacagcgaggagagtgtgatgttgatgctgggtcgatgcctccctcacatcgtccccaat
gtcctccttgctaaacgagaggagttgattcctctcatcctgtgtactgcctgccttcac
ccagagcctaaagagagagaccagctcttgcacatcctctttaacctaatcaagagacca
gatgatgagcagagacaaatgatcttgacggggtgtgttgcgtttgcgagacacgtgggt
cccacacgtgtcgaggctgaactacttcctcagtgctgggaacagattaaccacaaatat
ccagagaggagactgttggtggcggagtcctgtggcgccttagcaccatatctgcctaag
gagattcgtagctccctggttttgtccatgttgcagcagatgctcgctgaggataaggct
gacatggtcagagaggctgtggtcaagagtctgggtattattatgggttatatagatgac
cctgataaatactcccagggttttgagctgatgctgctgtcacttggggacccgtcggag
cgtgtggtcagtgcagtccaccaggtcttcatccccgcttttgctgcctggaccacagag
ttgggcaccctgcaaactgcactcatcccttctcttttggcacgcatagagaagctactt
ctgcaaggagaacacggtctggatgaacacaagcttcacgtgttcctgtcagccctgcag
tctctcatccctcctctatttgctgtggtgctgcagaatgcacccttcaccagcagagcc
aaactccatggagacataccgccaatagaggtgactcggttccctagaccagcttctccc
ctccaggatgtggcgactatcataggcagcagggagatgctgagtgctctcctgcaactc
tacgaccaccagctagaacatgaaggaaccaccggctgggacagcctgttatgggttgtc
aaccaactgcttcctcagctcatagagatagtgggtcgtatcaacgtgacctcatcaacc
tgtgtccatgagttctctcgcttcttctggagattctgtcgcaccttcggcaagatcttc
accaacactaaggttaaaccacagttccaagagattctcagactatctgaagagaatgtt
gatgcctcagcagggaatggtattctcactaaagccacagtccctatctatgccactgga
gtgctgacatgttataaccaggatgaggatcgcaagttattggtgggtttcctggaggat
gtaatgaccactctgtctctgtcccatgcacctctcgacagcctaaaggcctcctttgta
gagctcggtgccaacccagtgtaccacgaattgctgctgactgttctgtggtacggtgtt
gtccatacctctgcactggtgcggtgtactgcagcacggatgtttgagctgctggtgaag
ggggtgaatgagacgctggtagctcagagagtggtgccggctctcatcacactgtcttcc
gaccccgaaatctctgtgaggatatctactattcctgcctttggtaccatcatggagact
gtcacacaaaaagagctgctggagcgtgtcaaaatgcagctagcgtcgttcttggaagac
cctcagtatcaagaccagcactctttgcacatggagatcatcaggacatttggaagggtc
ggacctaacgcagagccccgctttagagatgagttcgtgctgcctcaccttcacaaactg
gcgctggctaacaacagccaggcgacagagagcaagaggattgatatcgccacccagcta
ttcgaagcctacagcgccctctcctgctgcttcatttccgaggaagtgatggtcaaccac
ttcctgcctggcctcaggtgtctccgggccgacatggagcaactctcaccagagcacgag
gtgattctgagttctatgatcaaagaatgtgagatcaaggtggaaaacagaggaatggca
gatgcacaaggatccatgtccattgcatccagtttggtcggtgaggacgccaaaaccaag
ttcctgagtaagatgggtcagctaaccacgtcgggtgcaatgctggccaacgtcttccag
agaaagaagtga
DBGET
integrated database retrieval system
