Scomber scombrus (Atlantic mackerel): 134002933
Help
Entry
134002933 CDS
T10651
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04514
Cell adhesion molecules
ssco04810
Regulation of actin cytoskeleton
Brite
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
134002933
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134002933
Cell adhesion molecules [BR:
ssco04515
]
Integrins
Integrin alpha subunits
134002933
CD molecules [BR:
ssco04090
]
Proteins
134002933
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
134002933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134002933
NCBI-ProteinID:
XP_062297981
LinkDB
All DBs
Position
21:complement(12223494..12237220)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDWIISTTVFLSVLKAALCFNIDPVAWKTLSNSAAGFGYQVVQRQSDLLVSAPLEQLSPN
ERGQIFKCSTKDCTPVPVKVPSFAVNMSLGLTMTSDPNTQKTLACGPTIPKDCKSITQYS
GVCFEIDPSDHVGLPVPSSIEECRTKADIAFLLDGSGSVDYSDFERMKNFVKSVVKSFLG
KDTKFAITQFSSRVVIHYYFNTFKTDYWESQINSIKQLTGGTHTATGIQEVVNNVFSTYK
GSRPNVKKILIVITDGESNDGGDLRSAAKLAEKKKIVRFAVGVGNAFTKSTAKQELYTIA
SSRDKVFQVTNFSALDAIRQNLQDQIFSIEGSQTGGESLKMEMTQRGFSAAYVPPDSTRG
IQMAIVGANQWRGGFEEYTSEMLMNSYEPLDIELDSYLGYSMAVANTWYGPLTILGAPRY
RHRGIVMSVFKRHRQTQTIDPFNWQFKIGEYFGAVLCAMDVDRNSYTDLVLISAPMYMDS
DREGRVYVCSLSSLKIECHFDSPLVLRGDASDQGRFGSSLAVLPDLNQDGFNDLAVGAPL
ENYGQGSIYIFHGEGGGGRISTTYSQRIASSEVRQGLKFFGMSISQSSFDRSNDNLPDLA
VGSKGTVVLLRSRPIVMVETSVTFNPNQIQTQNCSTPLDNTAKICFTMTRHSVVNTASAI
INYTFTLDAQRKVPNNRAYIRDKQREQTGSLTLTFEQKCNDVKFLIQACPDDSLNPVNNE
LRFIFDGLPSSTGLRPSLAQQAQTTTFHPLVFEINCGTDNKCVDELKVDFNFTGSSEVKV
GIDELLDVTVSVENSHENSYNSRVILTYPPGLSYRKFTSLKGRIECNSLDSGAGLSQGRT
DCTVDKPIFKSNAKVLFIVSYGIDTNYKLDRTLIITANATSGNQHSSGSELYKKNTIDVK
YSIYATIESSLSYTNFSHGKNDLQKPVQQPIVLANDNRALNLTMVIRVPVKLGDKDIWVN
SNSLQIPDCHRVKDEKPTVTNFVAEIQKNKSLDCSVAWCRVFKCNRFMGSLEHKTYTISG
NLSSEWIEQIGLKSARFLLTSTATLEFDRNQYIFFLPGSNNNPLVHKIVTQVEVYPEPDF
TKEIVGGSLGGLALLSLLTAGLIKAGFFNSKYKNMMNEEQEAGEGAEGGEPAPE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggactggatcatttctaccacagtatttttgtcagtgttaaaagctgcactttgcttc
aatattgatcctgtggcttggaagaccctgagtaactctgctgcaggttttggataccag
gtggtgcaaagacagtcagatttgctggtcagtgccccccttgaacaactttcaccaaat
gaaagagggcaaatatttaaatgttccaccaaagactgcactccagtaccagtaaaagtg
ccaagttttgcagtcaacatgtcccttggtttgacaatgacaagtgatcccaacacacaa
aaaactttggcatgtggtccaaccatcccaaaggactgcaaaagtatcacccagtatagc
ggtgtgtgctttgagatagacccttctgatcacgttggactccctgtgccttcttctatt
gaagagtgtcggaccaaagcagacattgcatttctgttggatggctcaggcagcgtagat
tattctgattttgagagaatgaagaattttgtgaaaagtgttgtcaagtcattcctggga
aaggatacaaagtttgccatcacccagttctcctcgcgtgttgtcatccattactacttt
aatacttttaaaactgattactgggaatctcaaattaatagtataaaacagttaactgga
gggactcacacagctacagggatccaagaagttgtcaacaacgtcttctcgacatataaa
ggttccaggccaaatgtgaagaagattttaatagtcattacagatggagaatctaatgat
gggggtgatttgcgaagtgcagcaaaattagctgaaaagaaaaagattgttcgatttgct
gttggggtggggaatgcatttacaaagtccacagcaaaacaggaactgtacaccattgca
tcttcacgagacaaagtgtttcaagtgacaaactttagtgctcttgatgcaatacggcag
aatttgcaggaccaaatcttctctattgaaggatctcaaactggtggagagtcactgaaa
atggaaatgactcaaaggggattcagtgcagcttatgtgcctccggattctacacggggg
attcagatggctatcgttggtgccaaccagtggaggggaggcttcgaagaatacacaagc
gagatgttgatgaactcctatgagcctttggacatagagcttgacagttatctgggttac
tccatggcagttgccaacacgtggtatggcccactgacaattcttggtgctccaagatat
cgacacagaggaattgtgatgtcggttttcaaaaggcatagacaaacacaaactattgat
ccctttaattggcagtttaagattggtgaatattttggtgcagtgctttgcgccatggat
gtggatcgtaacagctacactgacctagtcctcatatctgcccctatgtacatggacagt
gatagagagggaagagtttatgtttgcagcctgtcaagtttgaaaattgagtgtcacttc
gattctccattagtactgagaggggatgcatctgaccagggaaggtttgggtcttctctt
gctgtactccctgaccttaaccaagatggtttcaatgatttggcagttggggcacctttg
gagaattatggacaaggtagcatctacatcttccatggtgaaggaggaggaggaaggatt
agtactacttactcacagagaattgcttcctctgaggtccggcaaggactgaagttcttc
gggatgtcgatcagtcagtcttcttttgaccgtagtaatgacaatctgcctgatttagcg
gtgggttcaaagggaacagttgtcttactcaggtcaaggcccatagtaatggtagaaact
tcagtgacattcaacccaaaccaaatccaaacccaaaactgctcaacaccactggataac
acagctaaaatctgctttaccatgaccagacactctgtcgtcaatacagctagtgcaatt
attaattacactttcacactggatgcccaacgcaaggtcccaaataaccgagcttacatc
agggacaaacaacgagagcagaccggatcattaactcttacctttgagcaaaaatgcaac
gatgtgaaattcctcattcaggcctgtccggacgattctctgaatccagttaacaatgag
cttcgattcatctttgacggtttgccttctagcacaggtctcagaccaagtctagcccag
caggctcagacaacaacctttcatcctttggtgtttgagatcaactgtggcactgacaac
aagtgtgtagatgagctgaaagtggatttcaacttcaccggatcctctgaggttaaagta
ggcattgatgaactgctggatgtcaccgtctcagtggaaaacagtcatgaaaactcctac
aacagccgtgtcattctcacttacccacccgggctttcctacaggaagtttacatcactg
aagggaagaatcgagtgcaactccttggacagtggagctggcttatctcagggaagaaca
gactgcactgttgacaagcctattttcaagagcaacgctaaggttctcttcattgtgtcc
tatgggatcgacaccaattataaacttgacaggacgttaattatcactgcaaatgccacc
agtgggaatcagcactccagtggaagcgaactttacaaaaaaaatacgattgacgtgaag
tacagcatttatgctacaattgaaagttccctcagctacaccaatttcagtcatggaaag
aatgatttgcagaaaccagtccaacaaccaattgtgcttgcaaatgacaacagagcgctg
aatttaactatggtgatcagggtgccagtaaagcttggtgataaagacatttgggtgaat
tccaacagcttgcagattccagactgccacagagtcaaagatgaaaaacctactgtcaca
aattttgttgctgagatacaaaaaaataagtctttggactgctctgtagcctggtgcaga
gtgttcaagtgcaatcgattcatgggaagcctggagcataaaacatatacaatctctggc
aaccttagctcagaatggatagagcagattggacttaagtctgccagattcctcttgact
agtacggccactctggagtttgacagaaaccagtacattttctttttaccagggtcaaat
aacaaccctctggttcacaagattgtgacacaggtagaagtgtatcctgaaccagacttc
accaaagagatcgtcggaggatccctgggagggttggctttactcagtctactcactgct
ggcctgattaaggctggattttttaacagtaaatacaagaacatgatgaatgaggaacaa
gaggctggtgaaggggctgagggaggcgaacctgcaccagaataa
DBGET
integrated database retrieval system
