Scomber scombrus (Atlantic mackerel): 134002950
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Entry
134002950 CDS
T10651
Symbol
hexd
Name
(RefSeq) hexosaminidase D
KO
K14459
hexosaminidase [EC:
3.2.1.52
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00511
Other glycan degradation
ssco00513
Various types of N-glycan biosynthesis
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
134002950 (hexd)
00511 Other glycan degradation
134002950 (hexd)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
134002950 (hexd)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
DUF4838
Motif
Other DBs
NCBI-GeneID:
134002950
NCBI-ProteinID:
XP_062298002
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Position
21:complement(5692123..5696492)
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AA seq
480 aa
AA seq
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MNCPPWPKGKKLVHLDLKGAPPRVEYLHKLIDLFSQLGADGLLVEYEDMFPYEGELKLLQ
ATAQPAYSREEVLSIQEVAKCKGMEVIPLVQTFGHMEFVLKHRPMWSLRELAHCVGTLNP
HKEEGVRLVMEMLRQVVELHPGLNTLHIGADEVYMLGEGEESKQWLASPGRTVEQLFLSH
VTKVAKAIKDTWPHMTVIMWDDMMRGMSQDTLKASGLVGLVQPMLWDYNPNLEVDKTVSL
LEKYCSAGMSDLWAASSFKGSTSVYTNVTSTQRHLENHLQWLNVAASLSAGINLKGIAIT
GWQRYDHLSVLCELIPVALPSLAACLQTLIHGQLSAEAQSKVTERLGVSSMEVEEMGSAA
DGTLLFPGRRLAESMVELNSLLNTDDIRFFENNMFVRGWFSPYQRQRKMVSPLITMQIHN
EASMYLAMLQQKGEEVRGEMVQLYPDSTAQEWIEEHVSPVMAPLQRIIDEIAACVKEMVP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcccaccttggcctaagggaaagaaacttgttcacttggatttaaaaggtgcc
cctccaagagtagaatacctacacaagctgatcgatttgttctctcagctgggagccgat
ggcctgctggtggagtatgaggacatgtttccttatgagggcgagctgaagctgctgcag
gccacagcgcagcctgcttacagccgggaggaggtattatccatacaggaagttgccaaa
tgtaaaggcatggaggtcatcccgctggtgcagacttttggccacatggagttcgtgttg
aagcaccggcccatgtggagcctgagggagttggcacactgtgtcggcaccctgaatccc
cacaaagaggagggggtgaggctggtgatggagatgctgaggcaggtggtggagctgcat
ccaggtctaaacacgctgcacataggagcagatgaggtgtacatgttgggtgagggtgag
gagtccaaacagtggttggcttcacctggacgcacagtggagcaacttttcctgagtcat
gtgacgaaggtggccaaggctataaaggatacatggcctcatatgactgtcataatgtgg
gatgatatgatgagaggcatgagccaggacacgctgaaagctagtggcctggtaggactc
gtccaacctatgctgtgggactacaaccctaatctggaggtggacaaaactgtgtctctg
ctggagaaatactgtagtgccggtatgtcagacctgtgggcggccagctctttcaaaggt
tccactagtgtttacaccaacgtaaccagcacacagagacacctagagaaccatttgcag
tggctgaacgtggcagcttctttatctgctggcattaacctgaagggcattgccatcaca
ggctggcaaaggtatgaccacttgtcagtactgtgtgagctgatacctgtggctcttcca
tcactggcagcctgtctccaaactctcatccatggccagttaagtgctgaggcccaaagc
aaagtgactgagaggctgggtgtctcctctatggaggtagaggaaatgggaagcgctgct
gatggtaccttgctgttcccaggaagaaggctggctgagtcaatggtggagcttaattca
ctccttaacacagatgacataagattttttgaaaacaacatgtttgtaagaggatggttc
agcccctaccaaagacagaggaagatggtatcccctctcatcaccatgcagattcacaac
gaagcatcaatgtatttggcaatgttgcaacagaagggggaggaagtgagaggggagatg
gtccaactttacccagattcaacagcccaggagtggatagaggagcatgttagccctgta
atggctcctctgcagaggattatagatgaaatcgcagcctgtgtgaaggagatggtgcca
tag
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