Scomber scombrus (Atlantic mackerel): 134003042
Help
Entry
134003042 CDS
T10651
Symbol
pigf
Name
(RefSeq) phosphatidylinositol-glycan biosynthesis class F protein
KO
K05287
GPI ethanolamine phosphate transferase 2/3 subunit F
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
ssco01100
Metabolic pathways
Module
ssco_M00065
GPI-anchor biosynthesis, core oligosaccharide
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
134003042 (pigf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIG-F
Dexa_ind
DUF2678
Motif
Other DBs
NCBI-GeneID:
134003042
NCBI-ProteinID:
XP_062298132
LinkDB
All DBs
Position
21:17778316..17781836
Genome browser
AA seq
219 aa
AA seq
DB search
MWDHEIRAMASTHAIIAASVFMATVLPAVVMPGFSVYGAHLLWIYSVSAAVTAVSVAVFW
LLGITPPTKKHTVGYKLSKLVRSCLYFFLSCLFFHTVLVLYGAPLIEFALETFSLAVLLT
SLTTLRCLCVLGPNVQAWIRVFSRHGAMSVWDTCLQITVACTLVGAWLGAFPIPLDWDRP
WQVWPVSCSLGGMIGFLTGLVAAPAWIHYHRKQLTYKCK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaccatgaaatcagagccatggcgtccactcacgccatcatcgccgcctcggtg
ttcatggccaccgtcctacctgccgtggtcatgccgggcttctcggtgtacggagctcac
ctgctgtggatttactcggtgtccgctgcagtgaccgctgtcagtgtcgccgtcttctgg
ctgctcggcatcacaccgcccaccaagaagcacactgtgggatacaagctgtccaagctg
gttcgttcctgtctctatttcttcctgtcgtgcctgttcttccacactgtgctggttctc
tacggagctccgctgatcgaatttgccttagaaactttctccttagctgtgctgctgacc
tctctaaccacattgagatgtctctgtgtgctcggccccaacgtccaggcttggatacga
gtgttcagtcgccacggagccatgtctgtgtgggacacctgtctacagattacagtggcc
tgcacattggtaggagcctggctcggagccttccctatacctctggactgggacaggcct
tggcaggtttggcctgtttcctgcagcctgggcggtatgattggcttcctgacggggctc
gttgctgctccggcgtggatccactatcatcgtaaacagcttacctacaagtgcaagtga
DBGET
integrated database retrieval system
