Scomber scombrus (Atlantic mackerel): 134003120
Help
Entry
134003120 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134003120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134003120
NCBI-ProteinID:
XP_062298236
LinkDB
All DBs
Position
21:complement(18203712..18212021)
Genome browser
AA seq
1035 aa
AA seq
DB search
MEQKDAADKTDNTSPVLVSVPSIQAWVHDFHPSYSAQTGGSVVAPSIIGSTVEGNININI
ISIAQEEALNHDIEDICVALQPQNNKIAGCQKKLKGTLKRRFGLLHQGMAKEAKKIPLYK
IYTELYINEGGSGEVNKEHEVRQIEMTSRMQVAQEKSISCNDLFALQEQNHPIRTVITRG
VAGIGKTVSTNKFTLDWAEERANTHLEFVFPFCFRELNPMIKETRSLVELVCAFFPETKD
TGIFTNGGNKMLFILDGLDESRLSLDFHNSEIMPDVTQRTTIAVLLTNLIRGSLLPLALV
WITSRPAASIQIPLEHIDIVTEVRGFNNPQKDEYFKKKISDEGLANRVITHVKSCRSLHI
MCHIPVFCYMAATVLEKKLVKADSKDSPKTLTQMYIHFLSLYEDSTKKSLPERRESNADY
MRDNLISLGKLAFKELEKGHLIFYESDLKRNGIDVTRASMFSGVYTQIFNEELTLCEEKM
FCFVHLSVQEFFAALYVFLAFNNDNMNVLVKKSSVSRRFPFRNSSELILYKEAVEKALRC
ENGHFDIFLRFLLGLSLESNQSLLKHLMTNNRTNPKTRTEIIKHIKEKIKSSTSPDRCLN
LFHCLNELNDHSLVEEIQSFLSSGSLNRDKLSSSQWATLVFVLLTSEEELSVFELSNYTR
SEEALRRLLPVMKTARVANLNACYLTAKCCDMLGNGISSSRVRELDLSNNNLTDAGLKQL
SSGLKNSKLHTFRLKSCNLTVDSSEVLVSVISSASCQLKELDLTDNDFLDVGVKKLSGGL
GSPHCKLEKLILSLCRVTEEGCIFLGSALNSSRLRELDLSYNHPGDAGLELLSALLDDPQ
CSLEKLSVEQCGESRIQPGPKKYTSQLTLDPNTAHIDLALAEENRKATRWTKQSYPDHPD
RFDFSRQVLCREGLTGRCYWETEWSGRALIGVAYRRMCRKGEGDECRLGRNDSSWGLNCN
KDGYRAFHKGVSVAMNIPSSSNKVGVYLDWSAGAVSFFRVSCGALTLLHTFQTTFTEPVY
PGFHLGWVDSTVYLC
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaaagatgctgctgataaaacagacaatacctctccagtcttggtgtcagtt
ccctctattcaagcttgggttcatgatttccatcccagctattccgctcagactggaggc
agtgtggtcgctccttccatcatcggctctacagttgaaggcaacataaacatcaatatc
atctcaattgcccaagaagaagcattaaaccatgacattgaagacatctgtgtggctcta
cagccacaaaataataagattgcaggatgtcaaaagaaactaaaaggtactctaaagagg
aggtttggccttttgcatcaagggatggcaaaagaagcaaaaaaaatacctctctataag
atctacacagagctctacatcaacgagggaggaagtggtgaagtcaataaagagcatgag
gtgagacagatcgagatgacatccaggatgcaggtggcccaggagaaatcaatcagttgc
aacgacctctttgctctacaggaacaaaaccacccgataagaactgtgatcacaagagga
gtcgctggcatcggaaaaaccgtatctaccaataaatttactctagactgggctgaggag
agagcaaacacacacctggaatttgtatttcccttctgtttccgagagctgaacccgatg
ataaaggaaacccgcagtctagtggagcttgtctgtgcctttttccctgaaacaaaagac
acaggaatctttaccaatggtggaaacaaaatgctcttcatcctggatggtctggacgag
agccgtctgtctttggacttccacaacagtgagataatgcctgatgtgacacagcgaacc
accatagctgtgcttttgaccaacctcatcaggggatcactgcttcctttggcgcttgtt
tggataacatcccgcccagcagcttccattcagatccctctggagcacattgatattgtg
acggaagtccgagggttcaacaacccccagaaagacgagtacttcaagaagaaaattagt
gatgagggcttagcaaacagagtaatcacacatgtgaaatcctgcaggagtctccacatc
atgtgccacataccagtcttctgttacatggcagcaactgttcttgagaagaagttggtg
aaggcagacagcaaagactcaccaaagactcttactcaaatgtacatccacttcttgtcc
ttgtatgaggacagcacgaagaagagcctgcctgaaagaagagagtcaaacgctgactac
atgagagataacctcatctctttgggtaaactggcctttaaagagctggagaaaggccac
ctgatcttctatgagagtgaccttaagcgaaacggtatagatgtcacacgggcatcgatg
ttctcaggggtctacacacagatcttcaatgaggagctgacactgtgcgaggagaagatg
ttctgctttgtgcatctgagcgtccaggagttctttgctgcgttgtatgtttttctcgca
ttcaacaatgacaacatgaacgtcttagtcaagaagtcatccgtgtcaagacgtttccca
ttcagaaattcatcagagctcattctctacaaagaagcagtggaaaaggctttgcggtgc
gagaatggacattttgacatcttcctgcgctttcttttgggcctgtctctggagtccaat
cagagtctgttgaaacatctaatgaccaacaacagaacaaacccaaagacaagaacagag
atcatcaaacacatcaaggagaagatcaagtcaagcacgtccccggacagatgcctcaat
ctgtttcactgcctgaatgagctgaacgaccactctctggtggaggagattcagagcttt
ctcagctcaggaagtctgaacagagacaaactctcatcttcccagtgggccactctggtg
tttgtgttactgacttcagaggaggagttgagtgtgtttgaactgagcaactacaccagg
tcagaggaagctctccggaggctgctgcctgtcatgaaaacagccagagtagcaaatcta
aatgcatgttacctcactgcgaagtgctgtgacatgttgggcaacggcatcagctcatcc
agagttagagagctggacctgagtaataacaacctgacagatgcaggactgaagcagctc
tctagtggactgaagaacagcaaactacacacattcagactgaagagctgcaacctaaca
gtggacagctctgaagtcctggtctcagttatcagctcagcctcctgccaactgaaagag
ctggacctcactgacaatgactttctggacgttggagtcaaaaagctctctggtggattg
gggagtcctcactgtaaactggaaaaactcattctgtccctgtgcagagtgacagaagaa
ggctgcatttttctgggatctgctctaaactcctcccgtctgagagagctcgacctgagc
tacaaccacccaggtgacgcaggcctggagctgctgtctgccctgctggatgacccacaa
tgcagtcttgagaaactcagtgtcgaacaatgtggtgaatctagaattcagccaggtccc
aagaaatacaccagtcaactcaccctggacccaaacacagctcacatagacctcgctctg
gccgaagagaacagaaaagcaacacgctggaccaagcagtcatatccagatcaccctgac
aggttcgatttctcgagacaggtgttgtgcagggagggtctgacaggacgctgctactgg
gagacggagtggagcgggagagctttaataggtgtggcctacagacgaatgtgcaggaag
ggagagggtgatgaatgcaggttaggccgaaatgactcttcctggggcctgaactgcaac
aaggatggttacagagcttttcacaaaggtgtaagcgttgccatgaacatcccatccagc
tccaataaggtgggagtctatctggactggtcagcaggggccgtgtccttcttcagggtc
tcttgtggtgcactgactctcctccacaccttccaaaccaccttcaccgagcctgtgtac
ccggggtttcatcttggctgggtggactccacagtgtacctgtgctaa
DBGET
integrated database retrieval system
